Blastomonas fulva: B5J99_09625
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Entry
B5J99_09625 CDS
T05612
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bfw
Blastomonas fulva
Pathway
bfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5J99_09625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfw03019
]
B5J99_09625
03009 Ribosome biogenesis [BR:
bfw03009
]
B5J99_09625
Enzymes [BR:
bfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B5J99_09625
Messenger RNA biogenesis [BR:
bfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B5J99_09625
Ribosome biogenesis [BR:
bfw03009
]
Prokaryotic type
rRNA processing factors
B5J99_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ASR51687
UniProt:
A0A222WYP1
LinkDB
All DBs
Position
complement(2054685..2057615)
Genome browser
AA seq
976 aa
AA seq
DB search
MTTRMLIDARHQEETRVAVLKGNRIEEFDFESAEHKQIKGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPREDKIALLAEEARHAKEEADALAAEEEADDAAGHGEDT
DYNDGLSDDGLIEADDEPIVAETLSGDSDGESEGEGDSESDSEGENAEDARESDGEGNGN
GRNSGRRKRRDGRGGKAKASDEARTNRMALRRRYKIQDVIQRRQVMLVQVVKEERGNKGA
ALTTYLSLAGRYCVLMPNSAHGGGISRKISNASDRKRLKTIIAEMKLPTTMGCIVRTAGL
SRTKPEIKRDFDYLARLWDEIREKTLKASAPEIIHSDSDLIKRAIRDIYNRDIEEVLVEG
EAGYRAAKDFMKLLMPSHARRVKSYADPVPMFQRYGAEDQLSAMYEPVVQLKSGGYLVIN
PTEALVSIDINSGRSTKEHGIEQTALSTNLEAAREIARQLRLRDMAGLVVIDFIDMEYGN
NVRKVEKAMRDALKSDRARIQVGRISGFGLMEMSRQRLRTGVLEASTRTCPHCDGTGLVR
TASSAGLSALRLLEEEAARGHGSLITLRTSQEASIYVLNNKRRDLAEIEERFGVRIEILP
NGENEGAKMEVTASGPRPEKTVTFQPIIDDDDDEEIEDEIDEIEEEEEAAPRRGRGDRGN
RGNRGDRGDRSERGERADRPERADRPERADGEERTERAPSQRTAEEGEGGRSKRRRRRRG
KRGKRDGDTALDENGQPVQTEASYDNGNEADFASEAGAEATGETDDQREDTGTDDATTAT
DDGGEAKPRRARRGRRGGRARKGGEGDTGGDAADEASSDAEAGGASADEAAPMIEASPAN
ADVAIADAAPETEDAAEAPAEKPKPKRKSRAKKPAAEAEAATEVAAEPEAAAASEADTEA
APEAEAKPKPKRAPRKKAAPKAEAPSEAVTDTAPAAKAADDADAQPVAQAAPAAGQPAAE
SNEPTRRGWWQRTFGN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcgcatgttgatcgatgcgcgccaccaggaagaaacccgggtggcggtgctc
aagggaaaccggattgaggaattcgatttcgaatctgccgaacacaagcagatcaagggc
aatatctaccttgccaaggtaacacgggtcgaaccttcgctgcaggcagcgttcgtcgac
tatggcggcaaccgccacggcttcctcgccttttccgaaatccatcccgactactatcag
attccgcgcgaggacaagattgccctgctcgcggaagaagcccgtcacgccaaggaagaa
gccgacgcgcttgctgccgaggaagaggccgatgatgccgcgggtcatggcgaggacacc
gactacaatgacggcctgtccgacgacggcctgatcgaagccgatgacgagcccatcgtc
gccgaaaccctgtcgggtgacagcgatggcgagagcgaaggcgaaggcgacagcgagtcc
gactccgaaggcgaaaacgccgaggacgcgcgcgagagcgatggcgaaggcaacggcaac
ggccgcaattcgggtcgccgcaagcgtcgcgatggccgtggcggcaaggccaaggccagc
gacgaggcgcgcaccaaccgcatggcgctgcgtcgccgctacaagatccaggacgtcatc
cagcgtcgccaggtgatgctggtgcaggtcgtcaaggaagaacgcggcaacaagggcgcc
gcgctcaccacctatctctcgctcgcaggccgctattgcgtgctcatgcccaacagcgcg
cacggcggcggcatcagccgcaagatctcgaacgcgtcggaccgcaagcgtctgaagaca
atcatcgccgagatgaagctgcccaccacgatgggctgcatcgtgcgcaccgccggcctt
tcgcgcaccaagcccgagatcaagcgcgacttcgactatctcgcacgcctgtgggacgaa
atccgcgaaaagacgctgaaggcgtcggcgcccgagatcatccactcggacagcgatctg
atcaagcgcgcgatccgcgacatctacaaccgggatatcgaggaagtgctggtcgaaggc
gaagcggggtaccgcgccgccaaggacttcatgaagctgctgatgcccagccatgcgcgc
cgggtgaagagctatgccgacccggtgccgatgttccagcgttacggcgccgaggaccag
ctgtcggcgatgtacgaaccggtcgtccagctcaaatcgggcggctatctggtgatcaac
ccgaccgaagcgctcgtttcgatcgacatcaactcgggccgttccaccaaggaacacggc
atcgagcagaccgcgctcagcaccaacctcgaggccgctcgcgaaatcgcccgtcagttg
cgcctgcgcgacatggctggccttgtcgtcatcgatttcatcgacatggaatatggcaac
aacgtccgcaaggtcgagaaggccatgcgcgatgcgctgaagagcgaccgtgcgcgcatc
caggtcgggcgcatctcgggcttcggcctgatggaaatgagccgccagcgcctgcgcacc
ggcgtgctcgaggcatcgacccgcacctgcccgcattgcgacggcaccggcctggtgcgg
accgcatcgtcggcgggcctgtcggcgctgcgtctgctggaagaagaggccgcgcgcggc
catggcagcctgatcacgctgcgcaccagccaggaagcatcgatctacgtgctcaacaac
aagcgccgcgatctcgccgagatcgaggaacgcttcggcgtgcgcatcgaaattctgccc
aatggggagaatgaaggcgcgaagatggaagtcaccgccagcggcccgcgtccggaaaag
accgtcaccttccagccgatcatcgatgacgatgacgacgaggaaatcgaagacgagatc
gacgagatcgaggaagaggaagaagcagcgccgcggcgcggccggggtgatcgcggaaat
cgcggcaaccgtggcgatcgtggcgaccgctccgagcgtggcgagcgggcagaccgtccg
gaacgtgctgatcgccccgaacgcgcagatggcgaagagcggaccgaacgcgcgccttcg
cagcgcacggccgaggaaggcgaaggcggtcgctccaagcggcgccgccgccgtcgcggc
aagcgcggcaagcgcgatggcgacaccgctctcgacgagaacggccagccggttcagacc
gaagcctcatacgacaatggcaacgaggcggatttcgccagcgaagccggcgccgaggca
acgggtgaaaccgacgaccagcgcgaagacaccggcacagacgacgcgaccactgccacg
gacgatggcggcgaagcgaagccccgccgtgcgcggcgcggtcgtcgcggtggtcgtgcc
cgcaagggcggcgaaggtgatacgggcggcgatgcagcggacgaggcatcgagcgatgcc
gaagccggcggtgcatcggccgacgaggctgcacccatgatcgaagcgtcaccggccaat
gccgatgtcgcgatcgcggatgctgcacccgagaccgaagacgccgctgaagcgcctgcc
gagaagcccaagcccaagcgcaagtctcgcgccaagaagccggcagccgaagcagaagct
gcgaccgaggttgccgcagagcccgaagctgctgcagcatccgaggccgacacggaagcg
gcaccggaagctgaagccaagcccaagcccaagcgcgcaccccgcaaaaaggctgcgccc
aaggccgaagcgccgtccgaagcggtgacagacaccgcacctgcggccaaggctgcggat
gatgcggacgcacagccggtagctcaggcggctcctgcggcaggccagcccgctgcggaa
agcaacgagccgacgcgtcgcggctggtggcagcgcaccttcggcaactga
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integrated database retrieval system
