Brevundimonas subvibrioides: Bresu_1614
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Entry
Bresu_1614 CDS
T01291
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bsb
Brevundimonas subvibrioides
Brite
KEGG Orthology (KO) [BR:
bsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsb03016
]
Bresu_1614
Enzymes [BR:
bsb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Bresu_1614
Transfer RNA biogenesis [BR:
bsb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Bresu_1614
Prokaryotic type
tRNA splicing ligases
Bresu_1614
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Ortholog
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GFIT
Motif
Pfam:
RtcB
RTC_insert
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ADL00925
UniProt:
D9QGV9
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All DBs
Position
1585920..1587140
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AA seq
406 aa
AA seq
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MRGHDVIENPDHVPIKAWTRGVPIEDAALKQLKNVASLPFIHKHVAVMPDVHWGMGATVG
SVIPTVGAIIPAAVGVDIGCGMMAVRTSIRAEHLPDDLSAIRSAIEAAVPHGRTDNGGRN
DKGAWAGEPPASAVTRWADLKAGYDAVVEAHPKAAHPRGFGHLGTLGTGNHFIELCLDEA
GDVWVMLHSGSRGVGNRFGTYFIERAKHEMRRWHINLPDQDLAYFPEGTDGFIHYVRAVS
WAQKYARANREVMMDSVLGVLKAFWPDLETTQEAVNCHHNYVSKERHFGKDVFLTRKGAV
SAKLDELGIIPGSMGAKSFIVRGKGNADSFCTCSHGAGRAMSRTEAKRRFTVEDHVRATE
GVECRKDAEVIDETPMAYKDIDAVIAAQTDLIEVVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggccatgacgtgatcgaaaacccggaccatgtgccgatcaaggcctggacccgg
ggggtgcccatcgaggatgcggcgctgaaacagctgaagaacgtggcctcgctgccgttc
atccacaaacacgtcgcggtcatgcccgacgtgcactggggcatgggtgcgaccgtgggg
tcggtgatcccgaccgtgggggccatcatcccggccgccgtgggcgtggacatcggctgc
ggcatgatggcggtgcggacctcgatccgcgccgaacacctgccggacgacctgtcggcc
atccgctccgccatcgaggcggccgttccgcacggccggaccgacaacggcgggcgcaac
gacaagggtgcctgggccggcgagccgccggcttcggccgtgacccgctgggcggacctg
aaggccggctacgacgccgtggtcgaggcccaccccaaggcggcgcacccgcgcggcttc
ggccacctggggacgctgggcaccggcaaccacttcatcgagctctgtctcgacgaggcg
ggggacgtgtgggtgatgctgcactccggctcgcggggcgtgggcaaccggttcgggacc
tacttcatcgaacgggccaagcacgagatgcgccggtggcacatcaacctgccggaccag
gacctggcctatttccccgaggggacggacggcttcatccactatgtccgggcggtgtcg
tgggcgcagaaatacgcgcgcgccaaccgcgaggtgatgatggactcggtgctgggcgtg
ctgaaggccttctggccggatctggagacgacgcaggaagcggtgaactgccaccacaac
tacgtctcgaaggagcgtcatttcggcaaggacgtgttcctgacccgcaagggcgcggtg
tcggccaagctggatgagctgggcatcatccccggctcgatgggggcgaaatccttcatc
gtgcgcggcaagggcaatgcggactcgttctgcacctgctcgcacggcgccggtcgggcg
atgagccggaccgaggccaagcggcgcttcacggtcgaggaccacgtccgcgcgaccgaa
ggcgtcgaatgccgcaaggacgccgaggtgatcgacgaaacgccgatggcctacaaggac
atcgacgcggtcatcgcggcccagaccgacctgatcgaggtcgtgcacaccctgcgtcag
gtggtgtgcgtcaagggatga
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