Barnesiella viscericola: BARVI_00045
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Entry
BARVI_00045 CDS
T02986
Name
(GenBank) endonuclease V
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BARVI_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvs03400
]
BARVI_00045
Enzymes [BR:
bvs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BARVI_00045
DNA repair and recombination proteins [BR:
bvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BARVI_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PhageMin_Tail
HTH_51
Motif
Other DBs
NCBI-ProteinID:
AHF11510
UniProt:
W0EKW6
LinkDB
All DBs
Position
complement(11956..12804)
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AA seq
282 aa
AA seq
DB search
MKYIGAHVSASGGVENAPVNAHTIGAKAFALFTKNQRQWQSPPLSDKSIQAFKERCEQYG
FAPEHILPHDSYLINLGHPQEEGLAKSRAAFLDEMQRCEQLGLKLLNFHPGSHLKEISMD
ECLSRIAESINQTLDKTQGVTAVIENTAGQGSNVGFQFEHLAAIIDQVEDKSRVGVCIDS
CHAFAGGYDLATAEGYEQTWKDFDRIIGFHYLRGMHLNDAKKGLNSRVDRHDSLGAGVLG
IGFFERLMQDPRFDNIPLILETPDESLWPQEISRLYELAAAR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacataggagctcatgtaagtgcctcgggcggtgtagaaaacgctcccgtaaac
gcacacaccatcggagcgaaggctttcgctctattcaccaagaaccagcggcagtggcaa
tcgccccccttgtcggataagagtatacaggcattcaaggagcgctgcgagcagtatgga
tttgcccccgaacacatcttgccgcacgacagctacctcatcaatctgggtcacccgcag
gaagaggggctggccaaaagccgggcagccttcctcgacgagatgcagcgctgcgaacaa
ctggggttgaaattactgaacttccacccgggcagccacctgaaagagatttcgatggac
gagtgtctgtcgcgcatcgccgagtcgataaaccagacactcgacaagacccagggggtt
accgccgtcatcgaaaacaccgccgggcagggcagcaacgtgggattccagtttgaacac
ctggccgctatcatcgaccaggtggaggacaagagccgcgtaggggtatgcatcgactcg
tgtcatgcctttgccggtggatacgacctggctacggccgaggggtatgaacagacgtgg
aaggattttgaccggataatcggatttcactacctgcggggcatgcacctgaacgatgcc
aagaaagggctgaactcgcgggtcgaccgtcacgacagtctgggagccggcgtgctgggc
atcggcttcttcgagcgcctcatgcaagaccctcgcttcgacaacattccgctcattctc
gaaacgcccgacgagagcctctggccgcaagaaatcagccgactctacgaactggcggcc
gcccgatag
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