Coxiella burnetii CbuK_Q154: CbuK_1374
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Entry
CbuK_1374 CDS
T00788
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cbc
Coxiella burnetii CbuK_Q154
Pathway
cbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CbuK_1374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbc03019
]
CbuK_1374
03009 Ribosome biogenesis [BR:
cbc03009
]
CbuK_1374
Enzymes [BR:
cbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CbuK_1374
Messenger RNA biogenesis [BR:
cbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CbuK_1374
Ribosome biogenesis [BR:
cbc03009
]
Prokaryotic type
rRNA processing factors
CbuK_1374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Thermo-DBP
Motif
Other DBs
NCBI-ProteinID:
ACJ20551
LinkDB
All DBs
Position
1335677..1337839
Genome browser
AA seq
720 aa
AA seq
DB search
MKRMLINATQPDEVRVAITDDSKLIDLDIEIPGQEHKKSNIYKGIITSIEPSLGAVFVNY
GSERHGFLPLKEISREYFLQDIEGDFDSIDINRVLKLGQELVVQVDKEERGTKGAALTTF
ISLAGSFLVLMPNNPRAGGISRRIEGDERDQLRETINQLSLPEGMGLIVRTAGLGRPKEE
LEWDLKILLRYWEAVKQAAVAKPGPYLIHQESDVIIRAIRDYLRQDVEEILIDDEVAFEN
ARHYINQVRPQFVERLKLYREHLPLFSRFQIEQQIENAHQREIRLPSGGSLIIDHSEALI
AIDINSARATRGASIEETALSTNLEAAEEIARQLRIRDIGGLIVIDFIDMTPLRNQREVE
NCLRNALSQDRARIQIGRISRFGLLEMSRQRLRSSLTRSTQIACPRCNAEGTIRSIESLG
LSIIHIIQEQASKAKNIHFQLQAPVDLATYLINEKRELLRDIEHHYPVKITIVPNQYMET
PLYQLRQIKIDPASLEHGKGMASYKLTKVFKTEAPQKQEIRALSEPAIQQFLTLPPAPTT
PRKTPTPGLFKRLMGKMFGSEEEPSTAVTPPVKPHVPERHKPSSPPRGRRQGGYASRKST
GPRRHHPRSGGGGGGHGQNRHGARSRRGTRGGRRDHGGGRGGPGYHTQSTGPMPPLGEDV
VDVNQLPMSTPPSPPPPFLTDADVPPSRDERRSGGINGDADHDAKPHPNGKVSDDNRGNR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgccactcagcctgatgaggtgcgcgtagctattacagac
gactctaaattaattgatctcgacatagaaattcccggtcaagagcataaaaaatccaat
atttacaaaggcatcattaccagcattgagccaagtctcggtgcggtgtttgttaattat
ggcagcgaacgccacgggtttttgccgctgaaagaaatctcccgggaatattttctccag
gacatcgaaggcgattttgattctattgacatcaatcgggtgcttaaactaggtcaagaa
ctggtcgttcaagtagataaagaagagcgggggacgaaaggcgccgccttaacgacattt
attagtttggcgggttcttttttagtacttatgcccaacaatccccgagccggcggcatt
tcgcgccgcatcgaaggcgatgagcgcgatcaattgcgcgaaacgattaaccaacttagc
ctccctgaagggatgggcttgattgtccgaacggcaggattagggcggcctaaggaagaa
ttagaatgggatttaaaaattttactgcgctattgggaagcggttaaacaagccgctgtc
gctaaacccgggccttatttgattcaccaagaaagtgatgtcatcatccgggcgattcgc
gactacttgcgacaagacgtcgaagaaatccttatcgatgatgaagtggcctttgaaaat
gctcgacattacattaatcaagtccgtcctcaatttgtagaacggctaaaactttaccga
gaacatctcccgctcttcagtcgattccaaatcgaacaacagattgagaatgcgcaccaa
cgtgagattcgccttccttcgggaggttctttaattatcgatcacagcgaagctttgatc
gctattgatattaactccgctcgcgctacgcggggggcgagcatcgaagaaactgcgctt
tccaccaatttagaagccgcggaagagatcgctcgccaattgcgcattcgtgacattggc
ggtctgattgttatcgactttatcgacatgaccccgcttcgcaatcaacgcgaagtcgaa
aattgtctgcgcaacgcattaagccaagaccgagctcgtatccagattgggcgtatctcc
cgatttggtttgttggaaatgtctcgccaacgcttgcgatcttcgctcacacgttccact
caaatcgcctgcccccgatgcaacgccgaaggtacaatacgtagcattgaatcattggga
ttatccattatccacatcatccaagagcaagcttccaaagccaaaaatatccatttccaa
ttacaagcgccggttgatttagcgacttatctcattaatgaaaaacgggaattattacgg
gacattgaacaccattacccggtaaaaattaccatcgttcccaatcaatatatggaaacc
ccgctttatcaattacggcaaattaaaatcgaccctgccagtctcgaacacggtaaaggc
atggccagctacaaactcactaaggtgttcaaaacagaggcgccacaaaaacaagaaatc
agagccttgagtgagcctgccatccagcagtttttaacgttgcctccggcgccaacaacg
cctcgtaaaacgcctacccccggcttattcaaacggttaatgggtaaaatgtttgggagt
gaagaagaaccttcaacggccgtgacgcccccggttaaaccccacgtgcctgaacggcac
aagccgtcttcccccccaaggggtcgaaggcaaggcggctacgcttcgcgcaaatcgaca
gggcccaggcgacatcatcctcgcagcggtggcggtggcggcggccatgggcaaaaccga
cacggggctcgctcacgccgcggaacgcgaggcggtcgccgtgatcacggcggagggcgg
ggcggccccggctatcatacgcaatcgacaggaccgatgcccccgctgggagaagacgtt
gtagatgtaaaccagctccctatgtctacaccgccatcgccaccaccaccttttctcaca
gacgccgacgtcccgccttctcgggatgagcgccgctctggcggcattaatggagatgcg
gatcacgatgctaaacctcatcctaatggtaaagtgagcgacgataatagaggcaatcgg
taa
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