Coregonus clupeaformis (lake whitefish): 121547235
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Entry
121547235 CDS
T08357
Name
(RefSeq) retinoic acid receptor alpha-A isoform X3
KO
K08527
retinoic acid receptor alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121547235
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121547235
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121547235
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121547235
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121547235
NCBI-ProteinID:
XP_041714336
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All DBs
Position
31:23304273..23425096
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AA seq
457 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHHYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDDKKPECTESYVL
STETEQMINRVSKAHKETFPSLCQLGKYTTSNSSERRVALDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGATGARTSGAPPGSCSPSLSPSSAQSSPSPTTQSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgtcgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgtttgatcccagagaaaggacttgtgcccgga
gcaccccatcactacagcacgtccatcagaaaccaacactggaacggctcgaatcactcg
atagagacacagagtaccagctcagaggagatagtgccaagcccgccatcaccccctcct
cccccgcgggtctataagccctgcttcgtgtgccaagacaagtcctcaggataccactat
ggagtcagtgcctgcgaaggctgcaagggcttctttcggaggagcatccagaagaacatg
gtgtacacatgtcaccgggagaagaactgcatcatcaacaaggtcaccaggaaccgctgc
cagtactgccggctgcagaaatgcttggaagtgggcatgtccaaggagtcggtgaggaac
gaccggaacaagaagaagaaggatgacaagaagccggagtgcacagagagctacgtgctg
agcacggagacggagcagatgatcaacagggtcagcaaggcgcataaggagaccttccct
tcgctctgccagctgggcaaatacactacgagtaacagctcagagcggcgtgtggctctg
gacgtggacctgtgggacaagttcagtgagctgtccaccaagtgtatcatcaagacggtg
gagtttgccaagcagcttcctggcttcaccacgctcaccatcgctgaccagatcaccctg
ctcaaggccgcctgtctggacatactgattttgcggatctgcacgcgctacacgccggag
caggacaccatgacattctcggatggcctgacgctaaaccgtacccagatgcacaatgcc
ggcttcggacctctcaccgacctggtgttcgccttcgccaaccagctcctccccctggag
atggatgatgctgagacgggactgctcagcgccatctgtctgctgtgtggagatcggcag
gacctggagcaggcagacaaggtggacgtactacaggagcccctactggaggctctgaag
atctacgtgaggaagaggaggcctcacaaaccacacatgttccccaagatgctgatgaaa
atcaccgacctgaggagcattagcgccaaaggagccgagcgtgtcatcaccctgaagatg
gagatcccgggctccatgccccctctcatccaggagatgctggagaactctgagggtctg
gagagcggggccacgggcgcccggaccagcggagcccccccaggcagttgcagccccagc
ctgtcccccagctccgcccaaagcagccccagccccaccacacagtcgccgtag
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