Cutibacterium equinum: O6R08_03770
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Entry
O6R08_03770 CDS
T09514
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cequ
Cutibacterium equinum
Pathway
cequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6R08_03770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cequ03019
]
O6R08_03770
03009 Ribosome biogenesis [BR:
cequ03009
]
O6R08_03770
Enzymes [BR:
cequ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
O6R08_03770
Messenger RNA biogenesis [BR:
cequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O6R08_03770
Ribosome biogenesis [BR:
cequ03009
]
Prokaryotic type
rRNA processing factors
O6R08_03770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
WCC80620
LinkDB
All DBs
Position
829181..831997
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AA seq
938 aa
AA seq
DB search
MLDTTDNTTLNSDENSTAEIPTTRRRRAASRPAGAPAQVEAPSAPVTITAAGTGSSVITS
DAQASDLPRPPMGRRRKAAKAQTTVEEPTTQPSKAETPASKSAAPKSAAPTSEEPTTAGS
TGEETTTAQTDKPRRTRTRRTGDSASTSTRTRTRSTRTAAETSEETPARTTRRGASETTP
SVDAERGTSQHRRATRRRSSAITANSEDVTVDKADTDKGTDDDPINAALAKAKAQTRSHK
VEGALANPFGLKDGEDRSTSDILDSLAAEIGGGEAAMPKKRRCRATRPSEAGRRTDETSE
NIEQVGEVEPDKDKGEAKGRKSGKKRETSDETIAESLEEETTSEVEDNTSEEDGQNRRRR
RRGGRRRRRSEDIEDSSSTDESDNGDDADGNSDNSSESASELGNSDATHRRRRRRRRRGE
DISGADDDPSEVVIKVREPRSRQSLADEVTGIEGSTRMEAKKQRRREGRAAGRRRSAVIT
DAEFLARRESVDRKMIVRQSEEYSQLAVLEDGVLVEHYVDRASATSSIGNIYLGKVQNVL
PSMEAAFIDIGRGRNAVLYAGEVDWDKYGTEGEDKRIEHALKSGDQVLVQVTKDPVGAKG
ARLTSHISVPGRFVVYSPGGHLSGISRKLADSERKRLKKIVEDAIPSDASVIVRTAAEGA
TEEDLVRDINRLKAQWEVIERKASTSKAPLLLYSEPDLTVRIIRDLFTADFSDLVIAGNG
GPDDAYDTIKAYVDHVAPEMASRLTHWEDADKDPFAEYRIDEQIAKALERKVYLPSGGSL
VIDRTEAMTVIDVNTGKFTGSAGNLEATVTANNLEAAEEIVRQLRLRDIGGIIVIDFIDM
VLPTNRELLVRRLTECLGRDRTRHQVAEVTSLGLVQMTRKKIGTGLAEAFTEECEACGGR
GYHRFDKPVDSQAPADGGERSKGRGRGRKGSSGKSQSA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacacgactgacaacaccacattgaattccgacgagaattccactgctgagatt
cccactactcgacgccgtagggccgcatcgcgtccggccggggctcctgcccaggtcgag
gcccccagcgccccggtgacgatcaccgcagccggtaccggcagctccgtcatcacctct
gatgcgcaggcttccgacctgccgcgccctccgatgggacgtcgccgcaaggccgccaag
gcgcagaccacggtcgaggagcccacgacgcagccgagcaaggctgagaccccggcctcg
aagtccgctgctccgaagtccgctgctccgacgtcagaggaacccacgactgccgggtcg
acgggcgaggagaccacgactgcccagaccgacaagccgcgccgcacccgcacccgccgc
accggcgactctgcctccacgtccacccggacgaggacgaggagcacccgcactgccgcc
gagacgagcgaggagaccccggcccgcaccacccgtcggggggcgtcggagaccactccc
tccgtcgatgccgagcgtggaacctcccagcatcgccgcgccacccgtcgtcgttcctcc
gcgatcaccgccaattccgaggatgtcaccgtcgacaaggcggacaccgacaagggcact
gacgacgatcccatcaatgctgccctggccaaggccaaggctcagacccgcagccacaag
gttgagggagccctggccaaccccttcgggctcaaggacggcgaggatcgttcgaccagc
gacatcctcgattccttggctgccgagattggcgggggagaggctgcgatgcccaagaag
cgtcgttgtcgcgccactcgtccttccgaggccgggcgccgcaccgacgagacctccgag
aacatcgagcaggtgggcgaggtcgagcctgacaaggacaagggcgaggccaagggccgc
aagtctggcaagaagagggagacctccgacgagacgatcgctgagtcgctcgaggaggag
accacgtccgaggtcgaggacaacacctccgaggaggacggccagaatcgtcgtcgccgt
cgtcggggaggacgtcgtcgccgtcgcagcgaggacatcgaggacagctcgtcgaccgac
gagtcggacaacggtgacgacgctgacggcaactcggacaacagctctgagagtgcctcg
gagctcggcaattcggatgccacccatcgccgtcgtcgtcgccgccgtcgtcgcggtgag
gacatcagcggtgctgacgacgaccccagcgaggtcgtcatcaaggttcgtgagccgcgc
tcgcgtcagtcgctggctgacgaggtcaccggtatcgagggctcgacccgtatggaggcc
aagaagcagcgtcgccgtgagggacgtgccgccggtcggcgtcgcagcgctgtcatcacc
gacgcggagttcttggcccgccgcgagtcggtggaccgcaagatgatcgtccgtcagtcc
gaggagtactcccagcttgcggtgctggaggatggcgttctcgtcgagcactacgtggac
cgtgcctcggccacgtcctcgatcggcaacatctacctgggcaaggtccagaatgtcctg
ccctcgatggaggccgcgttcatcgacatcggtcgtggccgtaacgccgtgctctacgct
ggcgaggtcgactgggacaagtacggcacggagggcgaggacaagcgcattgagcatgcc
ctgaagtctggggaccaggttttggtgcaggtcaccaaggacccggtgggtgccaagggt
gctcgtctgaccagtcacatctcggtgcccggacgtttcgtcgtctactcgcccggtggc
cacctctcggggatctcccgcaagctggctgactccgagcgcaagcgtctcaagaagatc
gttgaggacgccatcccctcggatgcctccgtcatcgtgcgtacggccgccgaaggggcc
accgaggaggatctggtccgcgacatcaatcgtctcaaggctcagtgggaggtcatcgag
cgtaaggccagcacgagcaaggcccccctgctgctgtactccgagcccgacctgacggtg
cgcatcattcgcgacttgttcaccgctgacttctccgacctcgtgatcgccggcaacggt
ggacctgacgacgcttacgacaccatcaaggcctatgtcgatcacgtcgccccggagatg
gcctcgcggctgactcattgggaggacgctgacaaggatcccttcgccgagtatcgcatc
gacgagcagatcgccaaggctctggagcgcaaggtgtacctgccctcgggtgggtcgctg
gtcatcgaccgtactgaggccatgacggtcattgacgtcaatactggcaagttcaccggg
tctgccggcaacctcgaggccacggtgacggccaacaacttggaggccgctgaggagatc
gtgcgtcagttgcggctgcgcgacatcggaggcatcatcgtcatcgacttcatcgacatg
gtgttgccgaccaaccgtgagcttctggtgcgtcgtctcaccgagtgcctgggacgggat
cgcacccgccatcaggttgctgaggtgacttcgctgggtctggtgcagatgactcgtaag
aagatcggcaccggtttggccgaggccttcaccgaggagtgcgaggcctgtggtggccgc
ggctaccatcgcttcgacaagccggtggattcccaggctccggctgatggtggcgagcgt
tccaagggccgggggcgtggccgcaagggttcctcgggcaagtcccagtccgcgtga
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