Carassius gibelio (silver crucian carp): 127951127
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Entry
127951127 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127951127
03036 Chromosome and associated proteins [BR:
cgib03036
]
127951127
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgib03037
]
127951127
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127951127
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127951127
UBL E3 ligases
127951127
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127951127
Cilium and associated proteins [BR:
cgib03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127951127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
PWI
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
127951127
NCBI-ProteinID:
XP_052404792
LinkDB
All DBs
Position
A1:complement(2424687..2429003)
Genome browser
AA seq
1059 aa
AA seq
DB search
MASPQMKERPSGVVLNTISKGASPESKCPICLDHYKNISYLDVCLHKFCFCCIREWSKNK
AECPLCKQPFNSIYHTIKSEDNYQKFDLRPTENGSFGNMAGQRFRYRTTLTGERRPATRR
TSSPPDHGVLFEGLRGSVPQRHNRDLHSMLRRLAEERQRREREGRSQRSLQEQQAVKFRR
ALYRRGVRVQNVEDGGRSRETSAEFFRRNPACLHRLVPWVKRELTVLYGSHGSLANIVQH
IIMTLITRHNLDEQPVLHELRPFLLTHTEHFLHEFLSFARSPFNMEAYDQRAVYDLPQAS
GEISRSETSVISISEDESDALVSGSQDYGTPSVTLSQAPWDDETPGPSYSSEPSQVLPFH
VRDSDSDSSVGEAVESVPHQDRLTDPGTVEEEHSSGSDEDCVIVGYVKPALERTPELVLL
SSDSEQSEQNAEPQSPDLSPADTQRNTLSRSREDKSGERHHERQLSGSRNRSSRSTRTHS
SSHGREHQLSKKSRHKRRRENESSFHSSYSHYSQRDRSRRCYTETCSSYTSYYRSVHRSR
SQSHRRRRSRDRQERRRSRSNSRINSSNRHSRSNSRINSSNRHSRSNSRINSSNRHSRSN
SRINSSNRHSRSNSRINSSNRRSRSNSRINSSNRHSRSNSRINSSNRQDRSHSRSNSRIN
SSNRQDRSHSRSNSRINSSNRHSRSNSRINSPNRHSRSNSRISSTNRQDRRRSRSNSRIN
SSNRHSRSNSRINSSNRHSRSNSRISSTNRQDRRRSRSNSRINSSNRHSRSNSRINSSNR
HSRSNSRISSTNRQDRRRSRSNSRINSSNRHSRSNSRINYSNRHSRSNSKINSSNHLDRS
HSRSNSRINSSNRHSRSNSRINSSNRHSRSNSRINSSNRQDRSHSQSNSRINSSSHQTSH
HDDHGRKKKYKTKHHEEPSRKSSSQLVTDSIDDGAKKKTKKHQKFKRKSRSPSIDDRSEG
KHHKKKKKKKKNKKHKRKSREHGSEERVGKNSPVFITIPSDSDEADPSEPSARNISAADS
TVTIADRATDSQPLDVEQESAAGAEWSSVCDAGNRPHTD
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccgcagatgaaggagcgtccgtccggcgttgtgttaaacactatatcaaaa
ggagcgtctccagaatccaaatgcccgatatgtctggatcactacaaaaacatatcgtac
cttgatgtgtgtctgcataagttctgcttctgctgcatccgcgagtggtcgaagaacaaa
gccgagtgccctttatgcaagcagccgtttaattcaatttatcacaccataaagtccgaa
gataactaccagaagttcgacctgcgaccaaccgaaaatggctcgtttgggaacatggca
ggccagagattccggtatcgcaccacgctcaccggcgagcgcagacccgcgactaggaga
acctcgtcccctcctgaccacggggtcttattcgagggcctgagagggtctgttcctcag
cggcacaatagagatctccacagcatgttgaggaggttagcagaggagagacagcggaga
gagagagagggaaggtctcagcgaagtcttcaggaacagcaagcggttaaattcagacgg
gctttgtacaggagaggcgtgcgagtccagaacgtggaggacggcggccgcagcagggag
acttctgcagagttcttcaggagaaatcctgcttgtctccacaggcttgtgccttgggtg
aaacgagagctgactgtcctgtacggttctcacgggtcgctagcaaacatagtgcagcac
atcatcatgactctgatcactcggcataacttggacgagcagcctgttctgcatgagctc
cggcccttcctgttaacccatacagagcacttcctgcacgagttccttagcttcgctcgg
tccccgttcaacatggaggcgtatgaccagcgcgccgtttacgacttgcctcaggcctcc
ggagagatcagccgctcggaaacctctgtgatctcgatctctgaggatgagagcgatgca
ttagtgtcaggttcccaggattatggcactcctagtgtgaccttaagccaagccccgtgg
gatgatgagaccccagggccatcctactcctcagagccctctcaggtgctgcctttccat
gtgagggactcggattctgatagtagtgtcggggaagcagtagagtctgtgccacatcag
gaccgtctgacagatcctggcactgtagaagaggagcattcctctggcagtgatgaagac
tgtgtgattgttggatatgttaagccagctttagaaaggacaccggaactggtcctgctt
tcctctgattcagaacaatctgagcagaacgctgagccacagagtcctgatctgtctccc
gctgacactcagaggaacaccttgtctcgctccagagaagataaatctggtgaaaggcat
catgagagacagctgtcgggatctagaaatcgatcgtctcgcagcactaggactcactcc
tcttctcatggcagggaacaccaattgtctaaaaagagcaggcataagcggagacgagaa
aatgagtcaagtttccactcctcgtatagccattacagtcaaagagaccgcagcaggaga
tgctacacagagacatgctcatcctacaccagctattacagaagtgtacatcgctctcgt
tctcaatcgcatcgtagaagacgaagcagggaccgtcaggaaagaagacgctcgagaagt
aattctagaatcaactcttccaaccgtcactcgagaagtaattctagaatcaactcttcc
aaccgtcactcgaggagtaattctagaatcaactcttccaaccgtcactcgagaagtaat
tctagaatcaactcttccaaccgtcactcgaggagtaattctagaatcaactcttccaac
cgtcgctcgaggagcaattctagaatcaactcttccaaccgtcactcgaggagtaattct
agaatcaactcttccaaccgtcaggacagaagtcactcgaggagtaattctagaatcaac
tcttccaaccgtcaggacagaagtcactcgagaagtaattctagaatcaactcttccaac
cgtcactcaagaagtaattctagaatcaactctcccaaccgtcactcgaggagtaattct
agaatcagctctaccaaccgtcaggacagaagacgctcgaggagcaattctagaatcaac
tcttccaaccgtcactcgaggagcaattctagaatcaactcttccaaccgtcactcgaga
agtaattctagaatcagctctaccaaccgtcaggacagaagacgctcgaggagcaattct
agaatcaactcttccaaccgtcactcgaggagtaattctagaatcaactcttccaaccgt
cactcgagaagtaattctagaatcagctctaccaaccgtcaggacagaagacgctcgagg
agcaattctagaatcaactcttccaaccgtcactcgagaagtaattctagaatcaactat
tccaaccgtcactcgaggagcaattctaaaatcaactcttccaaccatctggacagaagt
cactcgagaagtaattctagaatcaactcttccaaccgtcactcgagaagtaattctaga
atcaactcttccaaccgtcactcgaggagtaattctagaatcaactcttccaaccgtcag
gacagaagtcactcgcaaagtaattctagaatcaactccagctcacatcagacatcacat
catgatgatcatggaaggaaaaagaaatacaaaacgaagcatcatgaggaaccctcaagg
aaaagttctagtcaattggtcaccgattctattgatgatggtgcaaaaaagaaaaccaag
aagcaccaaaagttcaagaggaaaagtaggagtccaagcatagatgacagatctgagggg
aaacatcacaagaagaagaagaagaagaagaagaataagaaacacaagaggaagagcagg
gaacacggtagtgaggagagggtgggaaaaaacagcccagttttcattaccattcctagt
gacagcgacgaagctgaccccagtgaaccgtcagccaggaatatcagtgcagctgactcc
acagtcacgatagcagacagagccacagactctcagccgctagacgtggagcaagagtca
gctgctggagctgaatggagttctgtgtgtgatgcagggaatcgtccccacacagattaa
DBGET
integrated database retrieval system
