Ciona intestinalis (yellow sea squirt): 100185856
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Entry
100185856 CDS
T01056
Name
(RefSeq) tight junction protein ZO-2 isoform X3
KO
K05701
tight junction protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100185856
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
100185856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
Tricorn_PDZ
SH3_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
100185856
NCBI-ProteinID:
XP_002129483
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All DBs
Position
5:3489531..3510406
Genome browser
AA seq
1249 aa
AA seq
DB search
MDELIWQEHTYVIEKAPGVGFGIAISGGKDNPGVQSGDTSIILSDVVKQGPAYDKLKIND
IVLRVNGRPMYNVAHHQAVKELKNAGHRVELTIKRKVLVRVGRETPPPGRLSRSRSRDLD
DLPRHRSRSRDLDHSPDRHRYRSRSRDLDDSRRRHRSRSRDLDSSRHRRQRSRGRDVSRS
RSRTPPRSSRRGRSYSRSPSRSDRRRSPSYASSSPSVHRSRRGRSRSKTPPRRRSRSFTP
SSRSASPVRRGSPGRMESHKPMEDLRSASPLSPDPDSAASDGDMMVFPVKNREPKTVVLK
KTRWNNSYGLKLGTRIFIQDIQPGSLADKSSDISAGDTILMINGRNVDNKSVQEAIQIIG
LSKDKVTMLVKKQDGGTVSIPAERFRAPAAEPDKHEEDHKEDTASDEESDHSRRSSISKE
SEPAEPPVVPVQAKEPKVEPKSEKKQFGGIRVLPMGNAAAQESSSDSESSRSTPEPAPRS
KSDDGHDPHYSLPPADEETGPVLPPTARNIDFIKGKNVGIRLAGGNDVGIFVASVQENSP
AAKKGLKMGDQILSVNGVNFRNIIREEAVLTLMGLPAGEEVNIIAQPQPKVYQKILEHGT
GDSFYIRTHFKYEKSGDHEMSFKQGSAFRISDTLYQGMVGYWLAVRIGRNNMEIERGVIP
NSSRAEQLKMVQDRKIAQMKERGKGGIGRRFGKNTRSDAPSIGVSSNMFPAYERVVLREA
GFKRPVVIFGPLADIARERLAADYAAHYEVARNEGTVSGQKSNRKGVIRLNTIKDIIEKD
KHAVLDITPTAVQKLNYAQLYPIVVFLEPQSKATVKELRAKLACTEQEKKKKPGKLYDRA
TKMQRGYSHVFTDTIRLTSGSDDWYRKLYSTIKDQQSTPVWVSEDKLGGGGEEDTEGVTV
PGDDDQFSYVSAPASDYSVTTVGSEMLNSSRMSDDEEEDLPHKYPPKAPASSSDEEQGNK
FGDEDFDDALNEFEDEPPVEKPASPMLEPEPMPAAPPREKKLSKQASSATSSSSSSEEEP
PPLVAPKPPSSNRVITKVEPPRGRQEIPAGRFDPQSFLKNHIRGLNKTTTKEENPRAQQG
PPPPAHQPIRSVAAPVAREQPPPQERPQPSQAPRPEAVYAQVNKNRPTAQPQHNNNNLNP
NHKVTQESPWVVITRAKLITLFQTIHTGGIQLKITGIYRIIDTKNPHPNNQHNQLNTIDL
LDQVKQRQNQSLTSPTVQTSHKNTDPQFQMDFQMLHLSLSLCKRNIKTT
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctaatatggcaggagcacacctatgttattgagaaggctcctggtgtaggt
tttggtattgcaataagtgggggaaaggacaaccctggtgtacaaagtggagacacatca
attattctctctgatgttgtaaaacaggggccagcttatgataagcttaagatcaatgac
attgtgttaagggtaaatggaaggcccatgtataatgtagcacaccatcaagcagtgaaa
gaattaaagaatgcaggtcacagggtcgaattgactattaagcgtaaagttttggttcga
gttggaagagagacaccacctcctgggaggctgagtagaagtcgtagccgtgacttggat
gacttgccacggcaccggtcacgaagccgcgaccttgaccattcccctgacagacaccgt
taccgctcccgaagcagggatctagatgactcaaggagacggcaccgttccaggagccgc
gaccttgattcttcaagacaccgcagacagaggtcacgtggcagggacgtcagcaggagc
agaagcagaaccccacccaggagcagccgtagggggcgcagttacagcagatcaccctca
aggtcagatagaaggagatctccttcatatgctagcagcagtccatcagtgcatagaagc
agaaggggaagatctcgttcaaaaactccacctagaaggagaagccgaagtttcacaccc
agcagtcgtagtgccagccctgtacgcaggggttcacctggtagaatggagtcacacaag
cctatggaagacttgcgttctgcctcacccctctcccctgaccctgacagtgcagcatca
gatggggacatgatggtcttccctgtcaaaaaccgtgaaccaaagacagttgttcttaag
aaaacaagatggaacaattcatatggtttgaaacttgggacaagaatttttatccaagat
attcagcctggaagcttggcggataaaagctccgatatttcagcaggagataccattttg
atgatcaacggtcgaaatgttgacaacaaatctgtccaagaagcgattcaaatcattgga
cttagcaaggataaagtgacgatgctcgtgaagaaacaggacggaggaaccgtctctatt
cctgcggaaaggttccgcgctccggcagcagaacctgataaacatgaagaggatcataaa
gaagacacagcaagtgatgaggaaagtgaccactctcgtcgtagctcaatatcaaaagaa
tcagaacctgctgagcctccagttgtaccagtccaagctaaagagccaaaagtggaacca
aaatctgagaaaaagcaatttggaggaattcgtgtcctcccgatgggaaatgctgctgcc
caagagtcctcatctgactccgagagctcccgctccactcctgagcctgccccgagatca
aaaagtgatgatgggcatgatccccattactccttgcctcctgctgatgaagaaactggt
ccagttcttccacctacagctaggaatattgactttattaagggcaaaaatgttgggata
agacttgcagggggcaacgatgtgggtatatttgttgcttccgtgcaggaaaatagccct
gctgctaaaaaaggcttgaaaatgggggaccaaatattatctgtaaatggagtaaacttc
cgtaacataattcgtgaagaagcagttcttacattgatgggtcttcctgctggtgaagaa
gtaaatatcattgcccaaccgcaacctaaagtttaccaaaagatcctggagcatggaact
ggagattccttttacatccggactcacttcaagtacgagaagagcggagatcatgagatg
tctttcaaacaaggctctgcattcaggataagtgatactctctatcagggtatggtggga
tactggcttgctgttcgaatcgggaggaataacatggaaattgaaagaggagtcatccct
aacagtagcagagctgagcagttaaagatggttcaagataggaagatagctcagatgaag
gagcgtggcaagggaggcattggtcgtcgttttggtaaaaacactcgatctgacgctcca
tcaataggtgtcagttcaaacatgttccccgcatatgaacgtgtcgtgctacgtgaagct
ggtttcaagcgtccggttgttatatttggcccgctggccgacattgcacgtgagaggctt
gcagcagattatgcagctcattatgaagtagcaagaaatgaaggaactgtcagtggacag
aaatcgaacaggaaaggcgttatcaggttgaatacaatcaaagatatcattgaaaaggat
aagcatgctgtattggacatcacaccaacagcagttcagaaactgaactatgctcagctc
taccccatagttgtgttcctggagccacaatccaaagcaacggtgaaagaactgagagca
aaactggcgtgcactgagcaagagaagaaaaagaagccaggaaagttgtatgatagagct
acaaagatgcagagaggatatagtcacgttttcacagatacgatccgattaacatctggc
agtgatgattggtaccgaaagctgtactcaactattaaagaccaacagagcacaccagtg
tgggtgtctgaggacaagttgggaggtggaggagaggaggacacagaaggagtcaccgtt
cccggtgatgatgatcagttctcgtacgtctccgctcctgcaagtgattacagcgtgaca
accgtgggatcggagatgctgaactcctccaggatgtcggatgatgaggaagaggatctt
ccgcataaatatcctcccaaggcaccagcatccagttccgatgaggagcagggaaacaaa
tttggtgacgaagattttgatgatgctcttaatgaatttgaggatgaaccgccagtggag
aaaccagcttctcctatgttagaaccagaacctatgcctgcagccccacctagggagaag
aaactgagtaaacaagcctcttctgccacgtcaagctccagcagctcggaagaggagcca
ccccccctagttgccccgaagcccccctcctccaatcgcgttatcactaaagtcgaacca
ccgagaggcaggcaagagatacctgccggaagatttgacccacagtcgtttttaaaaaat
catattcgtggcttaaacaaaacgacaacaaaagaggaaaacccccgtgcccaacaagga
cccccaccccctgcacatcaaccaatcagatcagtcgctgccccggttgctagagaacaa
cccccaccacaagaaagaccccagccatctcaagctccaaggcctgaagctgtatatgct
caagttaacaaaaacagaccaactgcccaacctcagcacaacaacaacaacctgaacccc
aaccacaaggtcacccaagagagtccatgggtcgtgattacgcgagcgaaattgataact
ttatttcaaacgatccataccggaggaatccagctcaagataaccggaatataccggata
atagatacaaagaacccacaccccaacaaccagcacaaccaactcaatacaatagatttg
ctggatcaagtcaagcaaaggcagaaccaaagccttaccagccctacagtgcaaacaagc
cacaagaatacagacccccagtttcaaatggattttcaaatgctccacctaagtctaagt
ttgtgcaagagaaatataaagactacatga
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integrated database retrieval system