Columba livia (rock pigeon): 102089806
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Entry
102089806 CDS
T02912
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102089806 (PTCH2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
102089806
NCBI-ProteinID:
XP_021141472
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
LFALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEK
LGEESVYTSQMLIQTPKRDGENILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKS
GVPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLME
ELGQFTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPPSAPNKQSQQSPDIPAELSGGC
HGFSRKFMRWQEELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLFEHFKDDYEIHDISW
SEEKAAAILEAWQRKFVELAQDSIPANATQSVHAFSTTTLNDIMKSFSDVSAIRVAGGYL
LMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLA
LGIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSISNMIAFFMAALVPIPA
LRAFSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQE
LADANDNHACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHVVTVLPPTSQVCTSPTVL
LPPTDPLGSQVFAPSSSTRDLLAQLDETKGGRECVPLPFCRWSLADFAREKYAPLLLRTR
TKAVVAVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTK
GGFHYPGAQAALLNLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGR
ITHDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWA
SNDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTADFV
EAIESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLL
LNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALVSAGR
PLPSPAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLL
PVLLSVIGPPPEASLVDNSPRLSPPEPVPPCLGPGGLYIRRTPAWPATFPNPSDTERYAE
AMGSGTPRGPFIVPQTPAHILLEAGKDPSFPHITVLKPYKDSLEVQGKKEAPGPQPSAPL
PFGEPCPVPPRDYPQPCPPAARPAPPAAXXXXXXXXXXXXXXXXYTTVTATASVTVALHP
TLPGSYPSFGPEGFASGEQDCLEEPSTASTAMPNAFEMQSLGHHGAGARR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
ctcttcgccctgggctgccggatccagcggcactgcgggaaggtcctcttcgtggggctg
ctggtgttcggggcgctggccgtggggctgcgggtggcctccatcgagaccgacatcgag
cacctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaaggagaag
ctgggtgaggagtccgtctacacctcccaaatgttgatccagaccccgaagcgggatggg
gaaaacatcctgacgcaggaggccctgcagctccacctcgaggcggccctggccgccagc
aaagtccaagtctcactgtatggaaaatcatgggatttgaataagatctgctacaagtcg
ggtgtccccatcattgagaacggcatgatcgagaggatgatagagaagctgttcccctgt
gtgatcctgacacctctggactgcttttgggaaggctccaagctacagggaggctcagcc
tacctcccaggccgcccagacattcagtggagcaacctggaccctctgcagctgatggag
gagctagggcaattcacatcccttgaaggcttcaaagagctgctggacaaggcagaagtg
gggcaggcttacatggagcggccctgcctggaccctcgagacccccagtgcccccccagt
gcccccaacaagcagagtcagcaaagccccgacatcccagctgagctctcaggaggctgc
catggcttctccaggaagttcatgcgctggcaggaggagctgattttaggcggcacgacc
aaagactcccagggcaagctgttacgcgctgaggccctgcagaccatgttcctcctcatg
agccctcggcagctctttgagcacttcaaggatgactacgagatccacgacatcagctgg
agtgaggagaaggcggctgccatcctggaggcctggcagaggaaatttgtagagctggca
caggactccatcccagccaacgccacgcagagtgtccatgctttctccaccaccacactc
aacgacatcatgaagtccttctctgacgtcagtgccatccgggtggccgggggctacctc
ctcatgctggcctacgcctgcgtcaccatgctgcgatgggactgctccaagtcccaaggg
gctgtgggcctggccggggtcctgcttgtggctctctctgtggcctctggcctggggctt
tgctcgctgctgggcatctccttcaatgcagccaccacccaggtcctgcccttcctggcc
cttggcatcggtgtagatgacatgttcctgttggctcatgctttcactgagaccagccag
cacatccccttcaaggagcggacaggcgagtgcctgaagcgcacggggaccagcgtggct
ctgacctccatcagcaacatgatcgccttcttcatggcagccctcgtgcccatccctgcc
ctgcgcgccttctccctccaggctgctgtggttgtcgtgttcaactttgccatggtgcta
ttcgtcttccctgccatcctgagcctggacctgcaccgccgggagaaacgccggcttgat
atcctctgctgcttctacagcccttgctcctcacgggtcatccagatccaaccccaggaa
ctcgctgacgccaacgacaaccacgcctgccacccatccccttatgggcaccctggcatg
gccaccagcacccagatcaccaccactgtgcaagccttcacccgctgcgacccctcaggc
caccatgtcgtcactgtcctgccacccacctcccaagtgtgcacctcacccaccgtcctc
ctgccccccaccgaccccctaggctcgcaggtctttgccccatccagctctacccgggac
ctgctggcccagttggacgagaccaagggcgggcgggagtgtgttcccctgcccttctgc
cgctggagccttgctgacttcgcccgggagaagtatgccccgctgctcctgcggacccgg
accaaggcggtggtggcggtgctgttcctggcgctgctagggctgagcctctatggcacc
accatggtgcacgacgggctctacctgacagacatcgtgccgcgagacaccaaggcgcat
gccttcatctcagcccagttcaagtacttctccttctacaacatgttcatcgtcaccaag
ggtggtttccactacccgggcgcccaggctgccctgctcaacctgcaccaggccttcagc
accgtcaagtacgtggtgcgggagggcaaccgtgacctgcccaagatgtggctccactac
ttccaggactggctacgagggctccaggccacattcgacagggactggcaagcggggcgc
attacccatgacagctaccgcaacggctctgaggatggagcgctggcctacaagctcctc
atccagactggcaacaagaaggaacctttcaacttcaaccagctgaccacgcggcgtctg
gtggatgaaaatggcatcattccccccgacaccttctacatctgcttgacggtgtgggcc
agcaatgaccccctgggctttgctgcctcccaggccaacttctatcccccgccacctgag
tggatccatgacaagtacgacaccacgggcgagaacctgcgaatcccagcagcccagccg
ctggagttcgcccagttccctttctacctgagtgggctgcgtcgcacagctgacttcgtg
gaggcgatcgagagcgtacgggccatctgcagagaggctgcccagcgccatggggtgctg
agctaccccagcggctaccccttcctcttctgggagcagtacatcggcctgcgccactgg
ttcctgctggccatcagcatcctgctggcctgcaccttccttgtctgcgccctgctgctg
ctcaacccctggacagccggcatcatcgtctccatcctggccatgatggcagtggagctg
tttggcatcatggggctgatgggcatcaagctgagcgccatccctgtggtcatcctcatc
gcctcggtgggcatcggtgtggagttcactgtccacgtagccctggtgagtgcaggcaga
cccctgcccagccccgcagcgctggagcacacctttgcacctgtgatggacggtgccgtc
tccaccctcctgggtgtcctcatgttggctggctccgagtttgacttcatcatgaggtac
ttctttgcggtgctcacaatcctgacgctgctggggctgctgaacgggctggtgctgctg
cccgtcctgctctctgtcatcgggccacctcctgaggcatccctcgtggataacagcccc
cgtctgtcccctccggagccggtgccgccatgcctgggccctggggggctgtacatccgg
cgcaccccagcctggcctgccaccttccccaacccctcggacacagagcgctatgcagag
gccatggggtcaggcaccccccggggacccttcattgtgccccagaccccagcacacatc
ctgctggaggccggcaaggaccccagctttccccacatcaccgtgctgaagccctacaag
gacagcctggaggtccaggggaagaaggaggctcctggcccacagccctcggcccctctg
ccctttggggagccatgccctgtgccaccccgagactacccacagccctgcccgccggct
gcccggccggccccccccgcagccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnngttacaccaccgtcacggccactgcttcagtgacagtggccctgcacccc
acgctgcccggctcctaccccagctttggccccgagggctttgccagtggtgagcaggat
tgcctggaagagcccagcaccgccagcaccgccatgcccaatgccttcgagatgcagagc
ctgggacaccatggggcaggtgcccgacgctag
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