Colossoma macropomum (tambaqui): 118809677
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Entry
118809677 CDS
T09004
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118809677 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmao03310
]
118809677 (raraa)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118809677 (raraa)
Nuclear receptors [BR:
cmao03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
118809677 (raraa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118809677
NCBI-ProteinID:
XP_036429084
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Position
Unknown
AA seq
447 aa
AA seq
DB search
MSGKGNPSPHLNGFPVPHFSYFFPHVLGGLSPPAVPTLPISGYSTPSPATIETQSTSSEE
IVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKSC
IINKVTRNRCQYCRLQKCLEVGMCKESVRNDRNKKKKEEKKTECSESLTLSPDTEQMIDR
VRKAHQDTFPSLCQLGKYTTSNSSERRVSLDVDLWDKFSELSTKCIIKTVEFAKQLPGFT
TLSIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALKLYVRRRRPHK
PHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESSGSGASSR
PTGAPPGSCSPSLSPSSAQSSPPTHSP
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtaagggtaacccgagccctcacctgaacggcttccccgtcccacacttctcc
tacttcttccctcatgtgctgggcggcctgtcgccccccgcagtgcccaccctgcccatc
agcggatacagcacgccctctccagccaccattgagacgcagagtacgagttcggaggaa
atcgtcccgagccctccctctccgcccccaccgccacgggtctacaaaccctgcttcgtc
tgccaggacaaatcctccggctatcactatggcgtcagcgcctgtgaaggctgcaagggt
ttctttaggaggagcatccagaagaacatggtctacacatgccatcgagagaagagctgc
atcatcaacaaggtcacccgcaaccgctgccaatactgccgcctgcagaagtgcctggaa
gtgggcatgtgcaaggagtcagtgaggaatgacagaaataagaagaagaaggaggagaag
aagacggagtgttcagagagtctgacgctcagtcctgacacggagcagatgatcgacaga
gtgagaaaagcccaccaggacactttcccctcactgtgtcaactggggaagtacaccacg
agtaacagttcggagcggagggtttctctggacgttgatctgtgggataaattcagtgaa
ctctccactaagtgcatcattaaaacggtggagttcgctaagcagctgcccggcttcacc
acgctgtccatcgctgaccagatcacactcctcaaagccgcctgcctcgacatactgatt
ttgcggatctgtacgcgctacacaccggagcaggacaccatgacgttttcggacggtctg
acgctgaaccggacgcagatgcacaatgccggttttgggccactcactgacctggtgttc
gccttcgccaaccagcttctgccgctggagatggacgacgctgagacggggctcttgagc
gccatctgcctgctgtgtggagaccggcaggacctcgaagaggccgataaagtggacgtc
ctgcaggagccgctgctggaggctttgaagctgtatgtgaggaggaggagaccacacaaa
ccacacatgttccccaaaatgctcatgaaaatcactgacctgaggagcatcagcgccaag
ggtgcggagcgtgtgatcactctgaagatggaaattcccggctccatgccaccactaatc
caggagatgttggagaattccgagggtctggagagttcagggagcggagcctcgtctcgt
cccaccggcgctccgcccggcagctgtagcccttccctctctccaagctctgcccaaagc
agcccgcccacacactcaccctga
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