Chiloscyllium plagiosum (whitespotted bambooshark): 122562955
Help
Entry
122562955 CDS
T08871
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122562955
03036 Chromosome and associated proteins [BR:
cpla03036
]
122562955
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122562955
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122562955
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122562955
UBL E3 ligases
122562955
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122562955
Cilium and associated proteins [BR:
cpla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122562955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
zf-P11
Motif
Other DBs
NCBI-GeneID:
122562955
NCBI-ProteinID:
XP_043572195
LinkDB
All DBs
Position
2:113936023..114031805
Genome browser
AA seq
1035 aa
AA seq
DB search
MASATEDLKMENQFSPDPESSKIPHGVRADASPDAKCPICLDRFDNMSYIDRCFHKFCFR
CIQEWSRNKAECPLCKQPFNSIFHSVRTENDFQEYVLKATENGSFASPGGQRFRYRTTLT
RERRSTRQPRRSPVLPELPDNGVVFEGFGRQPRMYQGHSLRRMMQRMSARRRAQSEGRST
RQVQEQEMIRFRRELYRSGLRVRNVQDGGRYRDISAEFFRRNAACLHRLMPWLKRELCVL
FGSHGSVVNIVQHIIMSNIVRYDMESEAFQEELRPFLLSRTDHFLHEFISFARAPFNMES
YDQRANYDCPAPSYEEESDSDLSVITISPDTAQAQEEDRPTPNPSELALGLSQATWDDET
PGPSYSVTETVESANSSPGETFIVSEETPPQPGSSLLTASIKTDPGTNEEGSVRSIDDCL
IVGYVKPLAERTPELIELSSDSDASIQATSTEVAEQPVHIRFHSTSSLSSSTRSSSTRSS
ISRERLKRKKLKHKKSNKSKRDKHHSRKKSSHSRGSASRSSRHRERTLSRVRGSSKDRSR
MRSLSRDKHDLRRPEQPSTRDRTMVTYSYSRSEHRAKDWNRKERARSGSREPRAHQTQDR
RRSRNRERASFTRSRTRSQNSDCVVYRHRARSRSWSRGYPAPRDRQRSRSRERTYSYMRE
YQERNRAFSYQWERYSYHSRRNDGYESATRTRTHHRRGSPCSDYRIRSSSESTSFRSPSS
HRDDIYYQYGSYRSRSPSSTRSRTMSGRTDKIRQEKPGGKRKYKTHYLESFSSKEMKNAS
LQVANLSSEIHMLPRQEGSSPGPLSQCSSNSKSSSVLLESTLGSESKIKKHKEKKRSASV
EIVYEGKVTDASRHHKRKKKHKKKQKRERSSEQTDTEHHSPLVITIESDSDVIVSSMEDG
NSTSVTTTNLLTGNSFELDEKHVLRTMESPDTTPNIFLNRTNTDSLDVCRVSPDSDHSPP
NPHEETYLEQEDVNPVTDTDSHQNSKGEEREYEQHCSSPSRTLPKNSSDRPPLILKIPKR
FINGTNLFNRPTENA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgctaccgaagatttgaagatggagaaccagttttcaccagatcctgaaagc
agcaagattccacatggagtcagggctgatgcgtcacctgatgcaaaatgccccatctgt
ctagacagatttgacaacatgtcctacattgatcgctgctttcacaaattctgcttccgc
tgcattcaggaatggtcacgaaataaagctgaatgtcccctgtgcaaacaaccttttaac
tcaattttccacagtgtgcggactgaaaatgattttcaggagtatgtactgaaggcaaca
gagaatggctcatttgccagtccaggtgggcagaggtttagataccgaacaacgctgacg
cgcgaacgtcgcagcacccgccaacctcgaaggtcccctgttcttcctgaattgcctgac
aacggagtggtatttgaaggatttggaaggcagccccggatgtatcagggacacagcttg
cgtcgaatgatgcagcgaatgagtgcccggagacgagcacagtctgagggaagatccaca
cgccaggtccaagaacaagagatgatccgttttagacgggagttgtaccgatcgggcttg
agggtaaggaatgtccaggatggaggtcggtatcgagatatttctgccgaatttttccgg
cgcaatgcagcctgtcttcaccggttaatgccatggttaaaacgggagctctgtgtcttg
tttggctcccatggctctgttgtcaatattgtgcaacacatcatcatgtctaacattgtt
cgatatgacatggaaagcgaggcatttcaggaagaactccggccttttttactcagccgc
acagatcatttcttgcatgaattcataagctttgcacgggcaccattcaacatggaatcg
tatgatcagagggctaactatgactgtccagctccatcctatgaggaagaaagtgactct
gatttgtctgtaatcacaatctcccctgacactgctcaggctcaggaagaagatagaccc
actcccaatccttcagagttagcacttggcttaagtcaggcgacatgggatgatgaaaca
ccgggcccttcttattcagtgacagagacagtggagtcagctaactcctcacctggtgaa
acgtttattgtttctgaagagacaccaccacagcctggatcttcattgcttacagcatca
attaaaactgatccaggcacaaatgaagaggggtcagtccgttccatcgatgactgccta
atagttggttacgtaaagcctttagctgaaagaactcctgaactaattgagctaagttca
gactctgatgcttccattcaagccacaagcactgaggttgctgaacaacctgtacatata
cgattccacagcaccagcagtttgtcttcgtcaactagatcatcatcaactagatcatcc
atatccagggagcgattgaaaagaaagaagttgaaacacaaaaagagcaacaaatcaaaa
agagataagcaccacagtcgtaagaagagttcccattctaggggcagtgcatcacgttcg
agcaggcacagagaaaggacattgagcagagttcgaggcagttcaaaggatagatccaga
atgcgatcacttagtagagataagcatgatcttcggaggcccgagcaaccaagcaccagg
gatagaaccatggtgacttactcttacagtagaagtgaacatcgagctaaagactggaat
agaaaagagagggccagatcaggtagcagagagccccgtgctcatcaaactcaagataga
aggcgatcaaggaaccgagagagggcgtcgttcaccagaagtcggacgaggtcacagaac
agtgactgtgttgtttacaggcatagagccaggtcacgttcttggagcagaggttatcct
gctccgagagacagacagaggtccagaagtcgggagaggacatacagctatatgagggaa
taccaggaaagaaacagggctttctcctatcagtgggaaagatatagttatcacagtaga
aggaatgatggctatgaatctgcaactcgaaccagaactcatcacaggagagggtcacca
tgttcagattatagaattcgatccagttccgaaagtacaagtttcaggagtccaagtagc
catagagacgatatctattaccaatacggaagttatcgatcaagaagcccatctagtacc
cgatctagaaccatgtctggtaggaccgataagattaggcaagagaaacctgggggcaaa
cggaaatataagactcattatttggaaagtttctccagcaaagagatgaaaaatgcaagt
ttgcaagttgctaatttatcatcagaaattcatatgctgcccagacaggagggtagctcc
cctggccctctttcacagtgtagcagtaactcgaagagtagttcagtgttacttgagagt
acactaggcagtgaatcaaagatcaaaaaacataaggagaaaaaaagaagcgcaagtgtg
gaaatagtgtacgagggaaaggtaacagatgcaagtcggcaccataagaggaaaaagaaa
cacaaaaagaaacagaaaagggaaaggagcagcgagcagactgataccgaacatcattca
ccccttgtcataaccattgaaagtgatagtgacgtgattgtttcaagtatggaagatggc
aatagcacttccgtcacaactactaaccttctcacaggtaacagttttgaacttgacgag
aaacatgttctcaggacaatggaatctcccgacacaactccaaacattttcttgaatcgc
acaaacacagactctttggatgtgtgcagagtctccccagattctgatcatagtccacca
aatccacatgaagagacttaccttgaacaagaagatgtcaatccagtgactgatactgac
agtcatcagaattccaaaggggaagaacgagaatatgagcaacattgttcttcaccaagt
agaacccttcctaaaaactcttcagacagaccacctttgatactgaaaattccaaaaaga
ttcattaacggcaccaatttatttaaccgtccgacggaaaatgcttga
DBGET
integrated database retrieval system
