Lachnoclostridium phytofermentans: Cphy_1303
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Entry
Cphy_1303 CDS
T00619
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cphy_1303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_1303
Enzymes [BR:
cpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Cphy_1303
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Cphy_1303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABX41680
UniProt:
A9KNS9
LinkDB
All DBs
Position
1630880..1631782
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AA seq
300 aa
AA seq
DB search
MLKIGSHVGMSGKEAFFGSAKEAHSYDANTFMVYTGAPQNTRRKDISDLRLEEGFEFMKQ
HGISDIVIHAPYIINLGNSVNLDTYSLAVDFLAKEMERTKAFRSKYLVLHPGAHVGAGVD
AGIKQIVQGLNEVLTRDTDLYIALETMAGKGSEIGRNFEELARIYDGVKYNDRLRVCFDT
CHTNDAGYDVVNDFDGVIEQFDKLIGKEQIAVFHINDSKNDRGASKDRHENIGFGTLGFD
AISYIVHHSDFIEVPKILETPYVSLPNEKEKSLPPYRYEIEMLRNSVFDPQILEKIQNNR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagataggttcccacgtcgggatgagtggaaaagaggcgttttttggttctgct
aaggaagctcattcttatgatgcgaatacatttatggtatatacaggagcaccacagaat
acgagaagaaaagatatatcagaccttcgcttagaggaaggatttgagtttatgaaacag
catggaatttccgatatcgtgattcatgcaccgtatatcatcaatcttggtaattccgtg
aatttagatacttatagcttagcagttgattttttagcaaaagaaatggaaagaaccaag
gcatttcgcagtaagtatttagttcttcacccaggagcacatgttggggctggtgtggat
gctggtattaaacaaattgtgcaaggtttgaatgaagttttaacgagagatacagatctc
tatatcgcactagaaactatggctggaaaaggcagcgaaataggaagaaactttgaagaa
ctagctagaatatatgacggtgtcaagtataatgaccgtttacgtgtttgctttgatacc
tgtcataccaatgatgcaggatatgatgttgtaaatgattttgatggagtcatagaacaa
ttcgataaactgataggcaaagaacaaattgcggtgttccatatcaatgatagcaaaaat
gatagaggggcatcgaaagatcgtcatgaaaacattggatttgggacattaggctttgat
gcaattagctatattgttcatcatagtgattttatcgaagtaccaaagattcttgaaacc
ccatatgttagtctgccaaatgagaaagagaaatccttaccaccgtaccgatatgaaatt
gaaatgttaagaaatagcgtatttgatccacaaatcttagagaaaatacaaaataaccga
tag
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