Citrobacter rodentium: ROD_00921
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Entry
ROD_00921 CDS
T01145
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
cro
Citrobacter rodentium
Pathway
cro00300
Lysine biosynthesis
cro00550
Peptidoglycan biosynthesis
cro01100
Metabolic pathways
cro01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROD_00921 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROD_00921 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ROD_00921 (murF)
Enzymes [BR:
cro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
ROD_00921 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
CBG86872
UniProt:
D2TGE3
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Position
110407..111765
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AA seq
452 aa
AA seq
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MISVTLSQLAGILGGELKGDDLTLDAVTTDTRKLTPGCLFVALKGERFDAHDFADKAKAG
GAGALLVSRPLDCDLPQLIVKDTRLAFGELAAWVRAQVPARVVALTGSSGKTSVKEMAAA
ILSQCGNTLYTAGNLNNDIGVPMTLLRLTKEHDFAVIELGANHQGEIAWTVSLTRPEAAL
VNNLAAAHLEGFGSLAGVAKAKGEIYSGLPENGIAIMNADNNDWLNWQSVIGDRKVWRFS
ANAADSDFTATNVHVTSHGTEFTLQTPVGSIDVLLPLPGRHNIANALAAASLSMAAGAPL
AAIKAGLANLKAVPGRLFPVQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGD
MAELGAESEACHLQVGNAAKAAGIDRVLSTGKLSQAISEASGVGEHFADKTALIARLKAL
VEEQQMITILVKGSRSAAMEEVVRALQEKGTC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattagcgtaacgctgagccaactggccggaatcctcggcggcgaactgaaaggggac
gatctgaccctcgacgccgtgaccaccgatacgcgtaaactgacgccgggctgcctgttc
gtggcgcttaagggtgagcgttttgacgcccacgattttgccgacaaggcgaaagcgggc
ggggcgggggcgctgctggtcagccgtccgctggattgcgatttaccgcagctgattgtc
aaagacacccgtctggcatttggcgaactggccgcgtgggtacgcgcgcaggttccggcg
cgggtggtggcgttaaccggttcctccggcaaaacctccgtcaaagagatggccgccgcc
attctcagccagtgcggcaacacgctgtataccgccggcaatctgaataacgatatcggc
gtcccgatgacgctgctgcggttaaccaaagagcatgattttgcggtcatcgaactgggc
gctaatcaccaaggggaaattgcctggaccgtcagcctgacccgtccggaagcggcgctg
gtcaacaatctggctgcggcgcacctggaaggcttcggctctctggccggcgtggcgaaa
gcgaaaggcgaaatctatagcggcctgccggaaaacggcattgccataatgaacgccgat
aacaacgactggctgaactggcagagcgtgatcggcgatcgtaaggtctggcgcttttca
gccaacgccgccgacagcgatttcacggcgacgaacgtccatgtgacctcgcacggtacg
gagttcacgcttcagacgccggtcggcagcattgacgtactcctgccgctgcccggacgt
cacaatatcgccaatgcgctggcggcggcgtcgctgtcgatggcggcaggcgcgccgctg
gcggcgattaaagccggtctggcgaacctgaaagcggtgcctggccgactgttcccggtc
cagctggcggaaaaccagctgctgctggatgactcctataacgccaacgtcggttcgatg
accgctgcggtgcaggtgctggcggaaatgccgggctaccgcgtgctggtggtcggcgat
atggcggagctgggggcagagagcgaagcgtgccatttacaggtcggcaatgctgcgaaa
gcggcgggtatcgaccgcgtgctgagcactggaaaactgagccaggctatcagcgaagcc
agcggcgtcggcgaacatttcgcggataaaaccgcccttatcgcccgtctcaaggcgctg
gttgaagagcagcagatgattaccattttagtgaagggttcacgtagcgccgccatggaa
gaggtggtacgcgcattacaggagaaaggaacatgttag
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