Chloracidobacterium thermophilum: Cabther_B0046
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Entry
Cabther_B0046 CDS
T01629
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctm03032
]
Cabther_B0046
03036 Chromosome and associated proteins [BR:
ctm03036
]
Cabther_B0046
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_B0046
DNA replication proteins [BR:
ctm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Cabther_B0046
Chromosome and associated proteins [BR:
ctm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Cabther_B0046
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Cabther_B0046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF4777
DUF2486
HU-CCDC81_euk_2
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
AEP13054
UniProt:
G2LJN7
LinkDB
All DBs
Position
2:complement(69388..69780)
Genome browser
AA seq
130 aa
AA seq
DB search
MAAKAPKSTATKATTKAKAAAPKEEAPAKKAPAKKAAAKPMTKTEIVNHFAEKFGLPKQK
VREFFDEQARLAAAQAKVGFMIPGIGKLVVREYKAREGRNPRTGEKITIKARKRLKFVIS
AAAKKAAGFE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaagctccaaaatccacggcaaccaaagccacaaccaaggccaaagcagcc
gctcccaaggaggaggcaccagccaaaaaggcaccggctaagaaagcggcagccaagccg
atgaccaaaaccgaaatcgtcaaccacttcgccgaaaagttcggcctcccgaaacagaag
gtgcgggagtttttcgatgaacaggcccggctcgcagccgctcaggccaaggtcggcttc
atgattccagggattgggaagctggttgtgcgggaatacaaggcgcgtgaggggcgcaat
ccacgcactggtgaaaaaatcaccatcaaagcccggaaacggctcaagttcgtcatttcc
gctgccgccaaaaaagcggccgggtttgagtaa
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