Cyprinodon variegatus (sheepshead minnow): 107091050
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Entry
107091050 CDS
T06110
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107091050 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107091050 (rara)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107091050 (rara)
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
107091050 (rara)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107091050
NCBI-ProteinID:
XP_015240253
Ensembl:
ENSCVAG00000005474
UniProt:
A0A3Q2DSA5
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSASIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTTNSSERRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccagagaaggggctggtgcccgga
gcgccccatccttacagcgcgtccatcaggaaccagcactggaacggctccaaccactcg
atagagacccagagcaccagttcagaggagatagtgccaagcccgccctcgcctccccct
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggattctttaggcgaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccggaatcgctgc
cagtattgtcggttacagaagtgcctggaagttgggatgtctaaagagtctgtgaggaac
gaccggaacaagaagaagaaggatgagaagaagcaggagtgcacagagagctacgtgctg
agtccagacacggagcagatgatcgacagggttcgcaaggcgcatcaggacactttcccc
tctctctgccagctgggcaaatacactacgactaacagctcggaaaggcgcgtctccttg
gacatcgacctgtgggacaagttcagcgaactgtccaccaagtgcatcataaagacggtg
gagtttgccaagcagctgccgggtttcaccacgctcaccatcgcggaccagatcaccctg
ctcaaagctgcctgtctggatattctgatactgcggatctgtactcgttacacgccggag
caagataccatgaccttctcagatggactcacgctaaaccgaacccagatgcataacgcc
ggctttggtcccctcacagacctggtttttgccttcgccaaccagctcctgcctctggag
atggatgatgcagaaacggggcttcttagcgccatctgcttgctgtgtggagatcggcaa
gatttagaagaagctgacaaagtggacatcctgcaggagccccttctggaggccctgaag
atttatgtacggaaacggaggccccacaaacctcacatgttccccaagatgctgatgaag
attactgacctgagaagcatcagcgctaaaggggccgagcgcgtcatcacactgaagatg
gagatccctggatccatgccgcctctcatccaggagatgctggagaactcggagggactg
gagagcggagctgcaggcagcaggcccagcggagcccccccaggcagctgcagtcccagt
ttgtcccccagctcggcccaaagcagtcccgccacccagtcgccgtag
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