Dehalogenimonas lykanthroporepellens: Dehly_1123
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Entry
Dehly_1123 CDS
T01264
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dly
Dehalogenimonas lykanthroporepellens
Pathway
dly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dehly_1123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dly03400
]
Dehly_1123
Enzymes [BR:
dly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Dehly_1123
DNA repair and recombination proteins [BR:
dly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dehly_1123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADJ26421
LinkDB
All DBs
Position
complement(1104096..1104941)
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AA seq
281 aa
AA seq
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MLIFGTAGIPLSTPPSGDTIAGLRQVSQLGLGSMEIEFVRSIYLRDNTAPPVACVGGKLG
LRLSCHAPYYLNLNASDEEKLRKSAVMIRQSARIASLAGARTLVFHPGYYLKEAPETVYF
RIKHQLEMIVDKLNDEGVSIELRPELAGKTSQFGTLSEILRLSKEIPGVAPAIDFAHLYA
ATGRYNSYPEFAQVLEKIGEVLGPDALKNLHLHVSGIESGNGGERRHRNLLETSYRYEEL
IQALIDFQASGLVICESPNIEDDALLLQSTWRELSPGPLKA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcttatattcggaaccgccggcattccgctcagcacccctccatccggtgataccata
gccggcctcagacaggtgagccagctgggtttggggtcgatggaaatagaattcgtgcgt
agcatttacctgcgggataatactgccccgccggtggcctgtgtcggcggtaagctgggg
ttgcgtctgtcctgtcacgcgccatattatcttaatctgaacgcatcagacgaggagaaa
cttcgcaagtcagcggtgatgattcgtcaatcggctcgcatcgcctctttagccggagct
cgaaccctggtttttcatcccggttactatctcaaggaggcgccggaaaccgtttatttc
aggataaaacatcagctggaaatgatcgtcgacaaactgaatgatgagggcgtgtctatt
gaattaaggccggaactggccggtaaaacgtcacaattcgggacgctgtcggaaatattg
cggttgtcgaaggagataccgggagtggctccggccattgacttcgctcatctgtatgcc
gcgacgggccggtataacagttaccctgaatttgcccaggtactggaaaaaatcggtgag
gttttagggccggatgcgctcaagaacctccatcttcatgtttccggtatagaatccggc
aatggcggagagcggcgtcaccggaatctgcttgaaaccagctaccgatatgaagaattg
atccaggcactgatagattttcaagcctccggtctggttatctgtgagagtcccaatata
gaggatgacgccttgttactgcaaagtacctggagagaactttcgcctggaccactcaag
gcatga
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