KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_116674
Entry
DAPPUDRAFT_116674 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K08527  retinoic acid receptor alpha
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dpx03000]
    DAPPUDRAFT_116674
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:dpx03310]
    DAPPUDRAFT_116674
Transcription factors [BR:dpx03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    DAPPUDRAFT_116674
Nuclear receptors [BR:dpx03310]
 1. Thyroid hormone like
  1B. Retinoic acid receptor (RAR)
   DAPPUDRAFT_116674
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-ProteinID: EFX66151
JGI: Dappu1_116674
UniProt: E9HQ36
LinkDB
Position
Unknown
AA seq 561 aa
MEFIAEAVHASIDLTQTDYHDTVNDFSPPRASSPVPTPVDHSHPDHDSYPTAFYRPENVQ
QQPEVLPSHYAAPPLECTTLEPTVSNVEIENSYGDMIANGMRVMHFMDHRPFDVFHHQQH
HYSSHYLPMTHYPPGYHPPVDGLTPEPYPPINSPASFSPHIIVPQPVLHNNSSNSNSSAN
SVGFQPYQSPHSQQCVDSNVIQMKSSNECDTSSDEQYGSYHIEMPPCSVCGDISCGIHYG
VVVCEGCKGFFRRANLRTPEEPAFICFYSSNCVVNRSNRNKCRACRLRRCYEVGMVFGDG
CELSKKRRRNRYGLSQDPPLPPPIHCRPRSLPSPDVLEWMGFVVAAQSASFTSVSEIFAS
RYAAVSSLGPDQLWPPCGDLSHHGYQAIQHFAHSLPFIAFLPPDLRAYLLETNALDVMIL
RLTFRFCLDRESFLFPTGAEVTKACLSSTLLGSTVANRLANLGRLVFRLGIGSDEMAFLS
ALALLSSDAMNDGSLHGYAPMLNDIANKVLQAFQYFVGQRWSTRPFFIGKLVALLSDIRA
LQHSVALQTWLAPTGSSSHSV
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggagtttatcgcagaggcggtgcatgcttcgattgatctcacccaaacggattatcac
gacaccgtgaacgatttttcacctcctcgtgcgtcatcaccagttccaacgccggttgat
cattctcatcctgatcacgattcctatcctactgcattttatcgcccagagaacgtccag
caacaaccagaggtcttaccatctcattacgctgcgcctccattagaatgtacaaccttg
gaacccactgtcagcaatgtagaaattgagaactcttacggcgatatgattgcaaatgga
atgcgtgtcatgcactttatggatcatcgcccatttgacgtgtttcatcatcagcagcat
cattattctagtcactatttacccatgacgcattacccgcccggttatcatccaccagtg
gatggactaacgccggaaccttaccctcccattaattcgccagcgtcattttctccacat
ataattgtacctcaacccgtactccacaataacagcagcaatagtaactcttctgctaat
tcagtcggatttcaaccttaccaatcacctcattcacagcagtgtgtcgattcgaatgta
atccaaatgaagagttcaaacgagtgtgacacaagcagtgacgagcaatatggcagttac
cacatcgagatgccaccatgtagtgtttgtggtgacatcagttgcggcattcattacgga
gttgtggtttgtgaaggctgcaagggctttttccgacgagcgaatttaagaaccccagaa
gagccggcgtttatatgcttttacagttcaaactgtgtcgtcaatcgttcaaatcgaaat
aaatgtcgagcttgtcgattgcgtcggtgctacgaagttggaatggtttttggtgatgga
tgcgagttgagcaaaaagcgccgtcgaaatcgatatggactgtcacaggatccacctctc
ccaccaccgattcattgtcggccgcggtcactgccatcgccggacgtactagaatggatg
ggtttcgttgtagcagctcaatcggcaagttttacttccgtttctgaaatattcgcttca
aggtatgctgccgtctcgtcattaggtccggatcaactgtggccaccttgcggggatctc
agtcatcacggttatcaggctatccaacattttgcccattctctaccgtttatcgctttc
ttgcctcctgatttgcgagcttacctgttagaaacgaatgcacttgatgtgatgattttg
cgactaacttttcgcttttgcttggatcgtgaatcctttctttttccgactggagctgaa
gttacaaaggcttgtctctcttccacactcttgggtagcacggtagccaatcgtcttgcc
aatctaggtcgactggtgtttcgattgggtatcggttccgatgaaatggcctttttgtca
gcgcttgctctactctcgtcggacgctatgaatgacggatccctgcatggctacgcacct
atgctaaacgatattgccaataaagttttgcaggcgtttcaatactttgttggacaacgt
tggtcaacccggccttttttcatcgggaaattggtcgctcttctatctgatatccgagct
ctacagcattccgtcgcactacaaacatggcttgcaccgactggctccagttcgcacagc
gtttaa

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