Etheostoma cragini (Arkansas darter): 117936654
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Entry
117936654 CDS
T07493
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117936654 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecra03310
]
117936654 (raraa)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117936654 (raraa)
Nuclear receptors [BR:
ecra03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117936654 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117936654
NCBI-ProteinID:
XP_034715827
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Position
21:12489563..12626863
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AA seq
456 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDDNKKQECTESYV
LSPDTERMIDRVRKAHQETFPSLCQLGKYTTSNSSERRVSLDVDLWDKFSELSTKCIIKT
VEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHN
AGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEAL
KIYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEG
LESGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccagagaaaggactggtgcccgga
gcgccccatccctacagcacgtccatcagaaaccagcactggaacggctccaatcactcg
atagagacccagagtaccagctcagaggagatagtgcccagcccgccatcacctcccccg
ccaccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgagggctgcaagggcttctttcggcgaagcatccagaagaacatg
gtgtacacgtgtcaccgggagaagaactgcatcatcaacaaagtcacccgtaaccgctgc
cagtactgccggctgcagaagtgcctggaagtcgggatgtccaaggaatcagtgaggaat
gaccggaacaagaagaaaaaggatgacaacaagaagcaggagtgcacagagagctatgtg
ctgagtcccgacacagaacgaatgatcgacagggttcgcaaggcacaccaggaaacgttc
ccctctctctgccagctgggcaaatacactacgagtaacagctcagaacgacgtgtatcc
ttggacgtagacctgtgggacaagttcagtgaactctccaccaagtgcatcataaagaca
gtggagtttgctaagcagctgcccggcttcacaacgctcaccatcgccgaccagatcact
ctgctcaaagctgcctgtctggacatcctgatactccggatctgtacacgctacacacca
gatcaagacaccatgactttctcagatggactcacgctaaaccgaacccagatgcacaat
gcaggtttcggcccccttaccgacctggtttttgcctttgccaaccagctccttcctcta
gagatggatgatgcagagacagggctgctcagcgccatctgtttgctatgtggagatcgt
caggacttggaacaggcggagaaggtggacgtcttgcaggagcccctcctggaggcgttg
aagatttatgtaaggcggaggaggccccacaaaccacacatgttccccaagatgctgatg
aagatcactgatctgagaagcatcagtgctaaaggagctgagcgtgtcatcacccttaag
atggagatccccggctccatgccccctctcatccaggagatgctggagaactcagaaggt
ctggaaagcggagccgccggcggccggcccagtggtgcccccccaggcagctgcagcccc
agtctgtcccctagctctgcccaaagcagtccagccacacaatcgccgtag
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