Epinephelus fuscoguttatus (brown-marbled grouper): 125890475
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Entry
125890475 CDS
T08419
Symbol
ptch1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125890475 (ptch1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
125890475
NCBI-ProteinID:
XP_049435101
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Position
LG6:complement(28366442..28426771)
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AA seq
1558 aa
AA seq
DB search
MASAANAPSEQENRDPDRPRIRRRNRGDYTRNTPLDLEYLQRPSYCDAGFALEQISEGKA
TGRKAPLWLRAKFQRLLFRLGCYIQKNCGKFLVVGLMIFGAFAVGLRAANLETDVEKLWV
EVGGRVNQELKYTRQNIGEEAMFNPQLMIQTPREDGANVLTVDALLQHLESAIRASRVHV
YLYNRQWKLEHLCYKSGELVTETHFMDQIIEKLHPCLIITPLDCFWEGAKLQSGMVYLPG
KDPLQWTNFDPKEFLEDLRRANFPVEGFEEMLEKADVGHGYMDRPCLNPADPDCPLTAPN
KNSTKPFDVARALSGGCHGLSRKYMHWQEELIVGGTTKNGSGPLLSAQALQTMFQLMTPK
QMFEHFRGYEEVSHINWNEEKAAAILEAWQRRYSEAVLQSVAANSSQKVLSFTTTTLEDI
LKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSL
LGISFNAATTQVLPFLALGVGVDDIFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVAL
TSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDI
FCCFYSPCANRVIQIEPHAYLDGADGSRYSPPPSYRTPPPSYRTPPPSYSSPPPSYSSHG
FAQQTQITMQSTVQLRTEYDPRTQAFYTTAEPRSQISVQPMNPAPTRSNPNNDFYSSSSS
DHSNLNNNNSGSRTNGGSRGSTTFSHHHPAAPPAAPTSSASSAPQGDAASSAGQGPENNS
STRDLLSQFGDGSLGLRCLEPPCSRWTLSSFAERHYAPFLLQPTTKVVVIVLFLCLLGVS
LYGTTQVRDGLELTDIVPRETSEYDFIGAQFKFFSFYNMYVVTQRADYAQKQPLLHQLHQ
RFHTVRYVLKEDNGQLPRMWLHYFREWLQGLQQAFDKDWEAGRITLNSYRNGSDDGVLAY
KLLVQTGRRDKPINFNLLTRQRLVDADGIINPGAFYIYLTAWVSNDPVAYAASQANIRPH
PPEWLHDRTDSMPETRLSIPAAEPIEYAQFPFYLNGLRETPQFVEAIESVRAICSNYSRQ
GLPSYPNGYPFLFWEQYVSLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVLVLSLMT
VELFGFMGLMGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRHKRAVLALEHMFA
PVLDGAFSTLLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSYFGPYPEV
SPVDGRSRLPTPSPEAPPHVVHFSVRPHHTTAATTTSGAASDSSDSEYSSNTTVSGISQE
LQNYNLPSHRGQTRAEEQQYHLQTSRGRAARTEEERRAGSGHRRSARQPEPPAYTVSSSS
QGCDAGPQPGATQRNSSRDPKSQLHRQAPPPARPRMDAFETATEAGGHYGSHGHREHSAG
HRARSSHNPQPNHHLPHHHHNPTPYCQPITTVTASASVTVAVHPAPLSNQGPPASSYPGY
TAADSYCPSGPEGQEPAFQDPHVPLDTHTGARGVNVEAMELQDLEFEAAESNSGRRAS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctgctaatgcgccctccgagcaggaaaacagagaccccgatcggccgagg
ataaggcggaggaacaggggggactatacccgcaacacaccgctggatttggagtatttg
cagcggccgagttactgcgatgcgggctttgctttggagcaaatatcggaggggaaggcg
actgggaggaaagcacctctgtggctgagagcaaagttccagagacttttatttaggctg
ggctgttacatacaaaagaactgcggaaagtttttggttgtgggcctcatgattttcgga
gcttttgctgtgggcttacgggcagctaatttggagacggatgtggagaaactctgggta
gaagttggtgggcgtgtgaaccaggaactaaagtacacgcgacagaatataggcgaggag
gccatgtttaaccctcagctgatgatccagacgccgcgggaggacggagccaatgtttta
acagtggatgcactcctgcagcacctggaatcagctatccgagccagcagagttcatgtt
tacctttataacagacaatggaaattagaacacttatgctacaaatcaggagaactagtc
acagaaactcattttatggatcagatcatagaaaagctacatccctgcctcatcatcacc
cctttggactgtttctgggagggagccaagctccagtctggaatggtctatctcccaggt
aaagaccctctgcagtggaccaactttgaccccaaggagttccttgaagacttgcgaagg
gcaaattttcccgtggaaggctttgaggaaatgttggagaaggcggacgtcggacatggc
tacatggatagaccctgtctgaaccctgctgaccccgactgccccctcacagcgcccaat
aagaactcaactaagccattcgacgtggcgcgggccctgagtggcggctgccatggtctg
tccaggaagtacatgcactggcaggaggaactgatcgtaggagggaccaccaagaatggc
agcggacccctgctcagtgcccaggccttacagaccatgttccagctgatgactcccaag
cagatgtttgagcactttcggggctacgaggaggtttcccacatcaactggaatgaagag
aaggctgcagccatactggaagcctggcagagaagatactctgaggcggtgctgcagagt
gtggcagcaaattcgtctcagaaggtcttgtctttcaccaccaccactctggaagatatt
ctcaagtccttctctgatgtcagtgtcatccgtgtcgccagtggatacctgctgatgctg
gcctatgcgtgtctgaccatgctacggtgggactgtgccaagtctcagggggctgtaggg
ctggcgggtgtcctgctggtgacgctgtctgtggctgctggcctgggcctctgctctctc
ctgggcatctccttcaatgctgccaccacgcaggtgctacccttcttggctctgggtgtc
ggagtggatgatatcttcctcctcgctcatgccttcagtgagaccggacagaacaagagg
atcccattcgaggaccgtacgggggagtgtctgaagaggacaggggccagcgtggctctc
acctccatcagtaacgtcacagcgttcttcatggcagcccttatccccatcccggcgctc
agagccttttctctacaggctgcagtggtggtggtgtttaactttgccatggtgctgctc
attttccccgccatcctcagcatggacctctaccgacgagaagacagacgtttcgacatt
ttctgctgcttctacagtccatgtgccaaccgtgtgatccagatcgagcctcatgcgtac
ctggatggggcggacggcagtcgctacagccctcctccatcctatcgcacccctcctccc
tcatatcgcacacctcccccaagttacagcagcccccctccctcctacagcagccatggc
tttgcccagcagactcaaatcaccatgcagtccacggtgcagctcaggacagagtacgat
ccccggactcaggccttttacaccacagctgagcccagatcccagatctctgtgcagcct
atgaaccccgctccgactaggagcaaccctaacaacgacttttacagcagcagtagtagc
gatcacagcaacctcaacaacaacaacagcgggagccgaactaatggggggtctcgaggt
tctaccaccttttcccatcatcatcctgcagctcctcccgctgctccgacttcaagtgca
agctcagctcctcagggcgatgcagcctcatcagctggccagggcccagagaacaacagc
tccacacgggacctgttgtcccagttcggagacggctcactgggcctgcgctgcctcgag
cctccctgctcccgctggactctgtcctctttcgctgagaggcactatgctccgttcctt
ctgcagccaaccaccaaggtggttgtgattgtgctcttcctctgcctgctgggagtcagt
ctatacgggaccacccaggtgagggacggcctggagctgacggacatcgtgcccagagag
accagcgagtatgacttcatcggcgcccagttcaagttcttctccttctacaacatgtat
gtggtgacgcagcgtgcagattacgcccagaaacagcctctgctgcaccagctccaccag
aggttccacaccgttcgctacgtgctaaaggaggacaatggacagctgccacgcatgtgg
cttcactacttcagggagtggctgcaaggtctccagcaggcgtttgacaaggactgggag
gccggtcgcatcaccctcaacagctacaggaatggctctgatgatggcgtcctggcgtac
aagcttttggtgcagacaggacgcagggacaagcccatcaacttcaacctgctgactcgt
cagaggcttgtggacgcagatgggatcatcaaccctggggctttctatatctacctaacc
gcctgggtcagcaatgatcctgtggcgtacgccgcctcgcaggccaacattcgcccacac
cctccagagtggcttcacgaccgtaccgactccatgcccgagacacgcctcagcatcccg
gctgctgagcccatcgaatacgcacagttccccttctacctcaacgggctccgggagaca
ccacagtttgtggaagccatcgagagcgtgcgggctatctgcagcaactacagccgacaa
ggcctcccctcctaccccaacggctaccctttcctgttctgggaacagtatgtcagtctt
cgccactggcttctgctgtccatcagcgtcgtgctcgcctgcacctttctggtctgcgcc
ctcttcctgctcaacccatggaccgccggcatcatagtgttggtgctttccctcatgact
gtggagctgtttggcttcatggggctgatgggaattaagctgagtgctgtccctgtggtc
attctcattgcctctgtgggcattggagtggagtttaccgtccacgtggctctggcgttc
ctgacagccataggggatcgtcacaagcgggcagtgctggcactggagcacatgttcgct
ccggtgcttgacggagccttttccaccttattaggagtcctaatgctcgctggctctgag
tttgactttatcgtcaggtatttcttcgcagtgttggccatccttacagttcttggagtt
ctgaatggactggtccttcttccagtattactctcatactttgggccttatccagaggtg
tctccagtcgatggtcgtagccggttacccacgccgtccccagaggcccctcctcacgtg
gtccacttctcagtccgtcctcaccacaccaccgcagccaccaccacctctggtgcagct
tcagactcatctgactcagagtacagctccaacaccacagtgtctggtatcagccaggag
ctgcagaactacaacctgccctcacacaggggacaaactcgtgcagaggagcagcaatac
cacctccagaccagcaggggcagagcagccaggacagaggaggaaaggagagcagggtca
gggcacaggcgctcagccaggcagcccgaacctcctgcatatactgtgtcttcgtcctct
cagggttgtgatgctgggcctcagcccggggctactcagcgtaacagcagcagggacccc
aagagccagctgcaccggcaggcaccgcccccagcccgcccgcgcatggacgcttttgaa
actgctactgaggctgggggccattatggctcacatggccatagagaacactcagcaggc
cacagagcccgctcttcccacaacccacagcctaatcaccacctcccgcaccaccaccac
aaccccaccccatattgccaacccatcactacggtaacagcttcagcctccgtcactgtt
gccgtccacccggcccccttgtccaaccagggcccccccgcttcctcttatccaggatac
actgcagcggacagttactgcccatcagggccggaggggcaggagcctgccttccaggac
ccacatgtgccgctggacacccacacaggggccagaggagtcaacgtggaggccatggag
ctccaagatttggagtttgaggcagctgagagcaacagtggcagacgagcaagctga
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