Gordonia polyisoprenivorans: GPOL_c29920
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Entry
GPOL_c29920 CDS
T01719
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
gpo
Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpo03032
]
GPOL_c29920 (hup)
03036 Chromosome and associated proteins [BR:
gpo03036
]
GPOL_c29920 (hup)
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c29920 (hup)
DNA replication proteins [BR:
gpo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GPOL_c29920 (hup)
Chromosome and associated proteins [BR:
gpo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GPOL_c29920 (hup)
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GPOL_c29920 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFA74009
UniProt:
H6MUM5
LinkDB
All DBs
Position
complement(3396235..3396834)
Genome browser
AA seq
199 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELIVDTIVRAVNRGESVTITGFGVFEKRRRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLSATGPAVKRGSGAGTTTAAKKTAAK
KAPAKKTAAKKAPAKKTAAKKAPAKTTATKTAAKKAPAKTTAAKKTAAKKAPAKKTAAKK
APAKKTAAKKAPAKKTTRR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgagctgaccaagaagctcgacgctgatcgcaagacc
gcgaccgaagcggtcgagctgatcgtcgacaccatcgtccgcgcggtgaaccgcggcgag
agtgtcaccatcaccgggttcggtgtcttcgagaagcgtcgtcgcgcaccgcgcgtcgca
cgcaacccgcgtaccggtgagaccgtgaaggtgcgcgccacctcggttccggcgttccgt
ccgggcgcgcagttcaaggccgtcgtcgccggcaagcagaagctctcggcgaccggtccg
gccgtcaagcgcggaagcggtgcgggcaccaccaccgccgcgaagaagaccgcggcgaag
aaggccccggccaagaagaccgcggcaaagaaggctcccgccaagaagaccgccgccaag
aaggccccggccaagaccactgcaaccaagaccgccgccaagaaggcgccggccaagacc
actgcagcgaagaagacggcggccaagaaggctcccgcgaagaagaccgcggcaaagaag
gctcccgccaagaagaccgccgccaagaaggctcccgccaagaagaccacccggcgctga
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