Halobacterium salinarum NRC-1: VNG_0183G
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Entry
VNG_0183G CDS
T00038
Symbol
xthA
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VNG_0183G (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_0183G (xthA)
Enzymes [BR:
hal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VNG_0183G (xthA)
DNA repair and recombination proteins [BR:
hal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VNG_0183G (xthA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AAG18797
UniProt:
Q9HSK7
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All DBs
Position
157481..158308
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AA seq
275 aa
AA seq
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MRVGAHVSIAGGVDNAVTNELDVGGNCGQIFTHSPQVWQDPNIGADEAAAFREGTAADLD
GPWVIHSSYLVNLCTPKDDLRAKSIDSMQAEVDAAHTLGIPYVNVHLGAHTGAGVDDGLD
NAASALDELDIPDDVTVLIESDAGSGTKLGGDFEHLHEVLTRSDQDLDVCIDTAHAFAAG
YDLSTEAAVNDTLAAFDDVVGLDHLQYVHLNDSKHACGTNKDEHAHIGEGHIGEAGMRAF
INHDAIADVPLVLETPHEDGRGFAWNIDRVRDLRA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcggtgcacacgtctccatcgcgggtggtgttgataacgccgtcacgaacgag
ctcgacgtcggcgggaactgcgggcagatcttcacgcactccccgcaggtctggcaggac
ccgaacattggtgccgacgaagcggcggcgttccgcgagggcaccgcggcggacctcgat
ggcccctgggtcatccactcgtcgtatctcgtgaacctctgcacgcccaaagacgacctc
cgcgcgaaatccatcgacagcatgcaggcggaggtcgatgccgcacacaccctcggcatc
ccatacgtcaacgtccacctcggcgcacacacgggcgccggcgtggacgacggtctcgac
aacgccgcgtccgccctcgacgagctcgacatccccgacgacgtgaccgtcctcatcgag
agcgacgccggctccggcacgaagctcggcggtgacttcgagcacctccacgaggtgttg
actcgctccgaccaggacctcgacgtctgcatcgacaccgcccacgccttcgccgcgggc
tacgacctctccaccgaggcggcggtcaacgacaccctcgcggcgttcgacgacgtggtc
ggcctcgaccacctgcagtacgtccatctcaacgactccaagcacgcctgcggtacgaac
aaggacgaacacgcccacatcggcgagggacacatcggcgaggcgggcatgcgcgcgttc
atcaaccacgacgccatcgccgacgttccgctggtgctggagacgccccacgaggacggc
agaggcttcgcgtggaacatcgaccgcgtccgcgacctccgggcgtaa
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