Halomonas elongata: HELO_2349
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Entry
HELO_2349 CDS
T01311
Symbol
hupB1
Name
(GenBank) HU-type DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hel03032
]
HELO_2349 (hupB1)
03036 Chromosome and associated proteins [BR:
hel03036
]
HELO_2349 (hupB1)
03400 DNA repair and recombination proteins [BR:
hel03400
]
HELO_2349 (hupB1)
DNA replication proteins [BR:
hel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HELO_2349 (hupB1)
Chromosome and associated proteins [BR:
hel03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HELO_2349 (hupB1)
DNA repair and recombination proteins [BR:
hel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HELO_2349 (hupB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CBV42233
UniProt:
E1VBW3
LinkDB
All DBs
Position
1539586..1539858
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AA seq
90 aa
AA seq
DB search
MNKSELIEAIAASADIPKAAASRALDAMVDAVADSLKKGDSVSLVGFGTFTVKERAARTG
RNPQTGEPIQISAAKVPSFKAGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatccgagctgatcgaagccattgccgcgtctgccgatattcccaaagccgct
gcctcgcgcgcgctggatgccatggtggacgccgtggccgatagcctgaagaagggtgat
agcgtgtccctggtgggtttcggtaccttcaccgttaaggagcgtgcggcgcgcaccggt
cgtaacccgcagacaggtgagccgatccagatcagcgctgccaaggtgccgagcttcaag
gccggcaaggcgctgaaggattccgtcaactaa
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