Hippoglossus hippoglossus (Atlantic halibut): 117753478
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Entry
117753478 CDS
T07778
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117753478 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hhip03310
]
117753478 (raraa)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117753478 (raraa)
Nuclear receptors [BR:
hhip03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117753478 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117753478
NCBI-ProteinID:
XP_034427494
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Position
19:11884457..12029847
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AA seq
457 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKECESVRNDRNKKKKDEKKQECTESY
VLSPDTEQMIDRVRKAHKETFPSLCQLGKYTTSNSSERRVSLDVDLWDKFSELSTKCIIK
TVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMH
NAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEAEKVDVLQEPLLEA
LKIYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSE
GLESGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattattacaaccagagcagaggatgcttgatcccggagaaaggactggtgcccggt
gcgccccatccttacagcacgtccatcaggaaccagcactggaacggctccaatcactcg
atagagacccagagtaccagctcagaagagatagtgccaagcccgccctcgcctcccccg
ccgccccgcgtctacaaaccctgcttcgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgcgagggctgcaagggcttctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaaccgctgc
cagtactgtcggctgcagaagtgcctggaagtcgggatgtccaaggagtgtgagtctgtg
aggaacgaccggaacaaaaagaaaaaggatgagaagaagcaggagtgcacggagagctac
gtgctgagtcccgacacggagcagatgatcgacagggttcgcaaggcacacaaggaaacg
ttcccctctctctgccagctgggcaaatacactacgagtaacagctcagaacgacgcgtg
tccttggatgtagacctgtgggacaagttcagcgaactctccaccaagtgcatcataaag
acagtggagtttgctaagcagctgcctggcttcacgacgcttaccatcgctgaccagatc
actctgctcaaagccgcctgtctggacatcctgatactgcggatctgtacacgctacaca
ccagagcaagacaccatgactttctcagatggactcacgctcaaccgaacccagatgcac
aacgccggctttggtcccctcaccgacctggttttcgccttcgccaaccagctccttcct
ctggagatggacgatgcggagacggggctgctcagtgccatctgtttgctgtgtggagat
cgtcaggacttggaagaggcagagaaggtggacgtcctgcaggagcccctgctggaggcg
ctcaaaatttatgtaaggaagaggaggccccacaaaccgcacatgttccccaagatgctg
atgaagatcactgatctgagaagcatcagtgctaaaggcgctgagcgtgtcatcaccctg
aagatggagatccccggctccatgccccctctcatccaggagatgctggagaactcagaa
ggtctggaaagcggtgctgcgggcggccggccaagcggcgccccccctggaagctgcagc
cccagtctgtcccccagctctgcccaaagcagtccagccacacaatcgccatag
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