Halomonas aestuarii: BOX17_01590
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Entry
BOX17_01590 CDS
T04554
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX17_01590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsi03019
]
BOX17_01590
03009 Ribosome biogenesis [BR:
hsi03009
]
BOX17_01590
Enzymes [BR:
hsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BOX17_01590
Messenger RNA biogenesis [BR:
hsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BOX17_01590
Ribosome biogenesis [BR:
hsi03009
]
Prokaryotic type
rRNA processing factors
BOX17_01590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
APE29765
UniProt:
A0A1J0VCK9
LinkDB
All DBs
Position
361195..364386
Genome browser
AA seq
1063 aa
AA seq
DB search
MKRMLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYRGKITRVEPSLEAAFVDF
GAERHGFLPLKEVSRDYFLKEPSGRPSIKEVLKEGQEVIVQVDKEERGNKGAALTTFISL
AGRFLVLMPNNPRAGGISRRIEGEERSQLKEAMGQLTVPDKMGMIVRTAGIGRSPEELQW
DLDYLVQVWESITEEAGKRPAPFLIYRESNVIIRAMRDYLRQDIGEVLIDSEEVHQEALA
FIRQVMPSYQQKIKLYVDEVPLFSRFQIESQIETAYEREVKLPSGGSIVIDHTEALVSID
INSARATRGSDIEETALQTNSEAADEIARQLRLRDIGGLVVIDFIDMSPARNQREVENRM
RDALKLDRARVQIGRISRFGLMEMSRQRLRPSLGETSGVVCPRCDGQGTIRDVRSISLSI
MRLIEEEAMKERSAQIRAILPVPVATYLLNEKRAVLAEIERRQGVRVVMLPNPDMDTPHY
DVQRLRDDHVDEEGTTNLSSFELPTDTEVGKEPEAAFGKPVQRAEAAVKTVIHHEPAPDS
LQKEEASTPPPAAPAAATRAPAQPAAEPEAGVLGRLVKGLAKLLGGDEAPAGQQKAPAAR
GGESRGNQDARKSAQRDDERGGQGGRQRRPRSDERRGSGAQDGGRGDGKAASGDGRDNRG
NRGGRGRGRQDDNRQAPRQQEPSRARDDKPRDEKPRDQKPREDSRRQKPSDKPAEKAADK
PSEKRADKPTTTEPVDDGKPKRTRNNPRNRTRKHAINPKAEAEQQRLQAEAADAPQAEEQ
VTAEAEKPEPAKSEQPTEAKPEQKPAEAKQPEPAKSEQPPVEAKKPEQAKPEQPKAEAKQ
ADQAKPEQKPAEAKQADQAKPEQKPAEAKQPEPAKPEQKPAEAKQPEPAKPEQKPAEAKT
PEPAKPEQKPAEAKQPDQAKPEQPKSEAKQPEQAKPEQKPAEAKQPEPAKPEQQAEAKQP
DQAKPEQKPAEAKKSEPAKPEQPKSEAKQPEQAKPEQKPAEAKQPEPAKPEQQAEAKQPD
QAKPEQKPATKASRRRGRRRAHNDPREIRRREQEAKAQEGKQG
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggatgctcatcaatgcgacccagccggaagagctgcgcgtcgcgctggtcgat
ggacaacgcctctacgacctggacatcgagtccggggcccgggaacagaagaaagccaac
atctaccgcggcaagatcacccgcgtcgaaccctccctcgaagccgccttcgtcgacttc
ggtgccgaacgccacggtttcctccccctaaaggaggtctctcgcgactacttcctgaag
gagccctccgggcgccccagcatcaaggaagtgctcaaggaaggtcaggaagtcatcgtc
caggtcgacaaggaggagcgcggcaacaagggggcggcgctgaccaccttcatcagcctg
gccggccgcttcctggtgctgatgcccaacaacccgcgcgccggcggcatctcgcggcgc
atcgagggcgaggagcgcagccagctcaaggaggccatgggccagctgaccgtgcccgac
aagatgggcatgatcgtgcgcaccgccggcatcggtcgctcccccgaggagctgcagtgg
gacctcgactacttggtccaggtgtgggaatcgatcaccgaggaggccggcaagcgcccg
gcgcccttcctgatctaccgcgagtccaacgtcatcatccgcgccatgcgcgactacctg
cgccaggacatcggcgaggtgctgatcgacagcgaagaggtccaccaggaggcgctggcc
ttcatccgccaggtgatgccctcctaccagcagaagatcaagctctacgtcgacgaggtc
ccgctcttttcgcgcttccagatcgaatcgcagatcgagaccgcctacgagcgtgaggtc
aagctgccgtccggcgggtccatcgtcatcgaccataccgaggcgctggtctccatcgac
atcaactcggcgcgcgccacccgcggcagcgacatcgaggagaccgcgctgcagaccaac
agcgaggccgccgacgagatcgcccgccagctgcgcctgcgtgacatcggcggcctggtg
gtcatcgacttcatcgacatgagtccggcgcgcaaccagcgtgaggtcgagaaccgcatg
cgcgacgccctcaagctcgatcgcgcccgggtgcagatcggccgcatctcgcggttcggc
ctgatggaaatgtcccgccagcgcctgcgcccgtcgctgggcgagaccagcggcgttgtc
tgcccgcgctgcgacggccagggcaccatccgcgacgtgcgctccatctcgctctccatc
atgcgcctgatcgaggaagaggccatgaaggagcgcagcgcccagatccgcgcgatcctg
ccggtgccggtggccacctacctgctcaacgagaagcgtgccgtgctggccgagatcgag
cgtcgccagggggttcgcgtggtgatgctgcccaaccccgacatggatacgccccactac
gacgtgcagcggctgcgcgacgaccacgtggacgaggaaggcactaccaacctctccagc
ttcgagctccccaccgataccgaggtgggcaaggagccggaggccgccttcggcaagccc
gtccagcgcgccgaggccgccgtcaagacggtgatccaccacgagccggcgcccgactcc
ctgcagaaggaggaggcctcgacgccgcctcccgccgcgccggccgccgccaccagggca
cccgcacagccggccgccgagcccgaggccggcgtgctgggtcgcctggtcaagggcctg
gccaagctgctcggcggcgacgaggccccggctggccagcagaaggctccggccgcccgc
ggcggcgagtcgcgtggcaaccaggacgcgcgcaaatccgcccagcgtgacgacgagcgc
ggaggccagggcggtcgccagcgccgaccgcgcagtgacgagcgtcgcggatcgggcgcc
caggacggaggtcgcggtgacggcaaggccgccagcggcgatggccgggacaaccgggga
aatcggggcggacgcggtcgcggtcgccaggacgacaaccgccaggcaccgcgccagcag
gagccgtccagggctcgcgacgacaaaccccgtgacgagaagccccgcgaccagaagccc
cgtgaggactcgcgccgccagaagccgagcgacaagcctgccgagaaggcggccgacaag
ccgagcgagaagcgcgccgacaagcccacgaccaccgagccggtcgacgatggcaagccg
aagcggacccgcaacaacccgcgcaaccgcacccgcaagcatgccatcaatcccaaggcc
gaggccgagcagcagcgtctccaggcggaagccgccgacgcgccccaggccgaagagcag
gtaacggccgaggccgagaagccggagccggccaagtccgagcagccgaccgaggccaag
cccgagcagaagcccgccgaggccaagcagccggaaccggccaagtccgagcagccgccg
gttgaggccaagaagcccgagcaggccaagcccgagcagccgaaggcagaggccaagcag
gcggatcaggccaagcccgagcagaagcccgccgaggccaagcaggcggatcaggccaag
cccgagcagaagcccgccgaggccaagcagccggaaccggccaagcccgagcagaagcct
gccgaggccaagcagccggaaccggccaagcccgagcagaagcccgccgaggccaagacg
ccggaaccggccaagcccgagcagaagcccgccgaggccaagcagccggaccaggccaag
cccgagcagccgaagtccgaggccaagcagccggagcaggcaaagcccgagcagaagccc
gccgaggcgaagcaaccggaaccggccaagcccgagcagcaggccgaggccaagcagcca
gaccaggccaagcccgagcagaagcccgccgaggccaagaagtcggaaccggccaagccc
gagcagccgaagtccgaggccaagcagccggagcaggccaagccagagcagaagcccgcc
gaggcgaagcaaccggaaccggccaagcccgagcagcaggccgaggccaagcagccagac
caggccaagcccgagcagaagcccgccaccaaggcgtcacgccgccggggtcgtcgtcgc
gcgcataacgatccgcgcgaaatccgccggcgcgagcaagaagccaaggcccaggagggc
aagcagggataa
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