Hippoglossus stenolepis (Pacific halibut): 118101843
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Entry
118101843 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118101843
04131 Membrane trafficking [BR:
hsp04131
]
118101843
04121 Ubiquitin system [BR:
hsp04121
]
118101843
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118101843
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
118101843
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118101843
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118101843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
118101843
NCBI-ProteinID:
XP_035003756
LinkDB
All DBs
Position
22:3536244..3542735
Genome browser
AA seq
483 aa
AA seq
DB search
MDQSDNDLQGSDGSGNLGGPDVRRRIPIKLISKQPIRSKPPPRAQRPSSRPTKSEPGEND
NFGFKQEDRFDCGAKSGDVFATQRRYPQPLFWDYKLHLIGERDEVPIHFCDKCGLPIQLY
GRMIPCKHVFCYDCALLHEKKGDKMCPGLTLYSCTDPVQRIEQCQRGSLYMCSVVPGCKR
TYLSQRDLQAHVNHRHLRAAKSSSGRQEPLHLGLSSDVPDRFRVPPPHLSKNHVHLPNPL
QHGGHDPYSQPPPPSAHDAPPPSSALGPETFRIATVTTRKHSNLITVPIQDDSSSSREPH
SGGLGPGQPPHHHPGDYPGQPPVVSHSHHMMAPPQQHFXPPPPPPPPISHPMQHPPQASG
TPHMVYNQAPPPPMSTAPPPITPPPGHIMPPYMNHPPPGPPPQHSGPPVNAPPPHHYNPN
SMQQFPEDQGTLSPPFSQPGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQGRYRP
YYQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagcgacaatgatcttcaaggaagcgacggctctgggaatttgggcggccca
gatgttcgaagacgaatccccatcaaactcatatccaaacagcccataaggagcaaacct
ccgccacgcgcccaaagacccagcagcaggccaactaaaagtgagcccggagaaaatgat
aactttggcttcaagcaagaggacaggtttgactgcggtgctaaatctggagatgtgttt
gcaactcagaggagatatccccagccactgttttgggattataagttgcatttgattgga
gaaagggatgaagtaccgattcacttctgtgacaaatgtggtctccctatccagctgtat
gggcggatgatcccctgcaaacatgttttctgctacgactgtgctttgcttcatgaaaag
aaaggagacaagatgtgcccaggcctcaccctctacagctgcacagatccagtgcagcgc
atcgagcagtgccagcgtggttcgctctacatgtgcagtgttgtgccgggatgtaagcgc
acctacctgtcccagcgtgacctgcaggcccatgttaaccaccgccacctgagggcagcc
aagtcgtcctcaggccgccaggagcccttgcacctcggcctgtcatctgacgtccctgat
cgtttccgtgtgcctccacctcacttatccaagaaccatgttcatctccctaacccactc
cagcatggcggccatgacccctacagccagccaccgccgccctctgctcacgatgccccg
cccccatcgtctgctttaggtcctgagacattccgcatcgctacggtaacgactcggaaa
cacagcaatctcataactgtgcccatccaagatgactcctcttcctcccgtgagccccac
tctggtgggctaggccccggtcagccaccccaccaccaccctggggactatcccggccag
ccacctgtcgtgtcccactcccaccacatgatggcgccaccgcagcagcactttnggccc
ccgcctccccctcctcctcccatcagccacccaatgcagcatccgccccaggcctctggg
acgccacacatggtgtacaaccaggcccctcctccccccatgtccacagctccaccacca
atcacgcccccaccagggcacattatgcccccttatatgaaccacccgcccccaggacct
ccaccacaacacagtggcccacccgtcaacgcccctccacctcatcattacaaccccaac
tcaatgcagcagttccctgaagaccagggcaccctcagtcccccgttcagccaaccagga
gggctcagccctgggatgtggcctgctccgagaggacccccacctccacggatgcagggt
cctcctccccagggccagatgcctggtccacatcacccagatcagggccgctaccggccg
tactatcagtaa
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integrated database retrieval system
