Ictalurus punctatus (channel catfish): 108259232
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Entry
108259232 CDS
T04658
Symbol
tjp1a
Name
(RefSeq) tight junction protein ZO-1 isoform X1
KO
K05701
tight junction protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04520
Adherens junction
ipu04530
Tight junction
ipu04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108259232 (tjp1a)
04530 Tight junction
108259232 (tjp1a)
04540 Gap junction
108259232 (tjp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259232 (tjp1a)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108259232 (tjp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
108259232
NCBI-ProteinID:
XP_053532404
UniProt:
A0A9F7QXV3
LinkDB
All DBs
Position
27:16584677..16685142
Genome browser
AA seq
1644 aa
AA seq
DB search
MKYQKYITVMQMAMGVTASNKDDCIPPKRQLWVPPSSDAATSSGPVPPGAAVSQGKPSLR
RIKGRVHRSKSLDSIDLLDCNSAAMEETVIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQ
SGETSIVISDVLKGGPAEGLLHENDRVVMVNAVSMDNVEHAYAVQQLRKSGKNAKITIRR
KRKVQIPAARAGDRETMSEREEDTEDEEFAGPGVGASAGTGRRNDRSASLGRREQSVSPR
SDRRSVASAGPPRPSKVTLVKSRKNEEYGLRLASHIFVKDITPESLAARDGNIQEGDVVL
KINGTVTENLSLTDAKKLIERSKGKLKMVVQRDERATLLNVPDVDDSVPSGNSERDDISE
IHSLTSDHSHEQLRGSRSRSPDKRSDPSDISSQSPQQISNGSHRSRDEDRTSKPPIVSTP
VKLAEDALLVPESEETDKQIPPLPEPKPVYAQPGQPDVDLPVSPSDAPVPNAAHDDSILR
PSMKLVKFRKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFANII
REEAVLFLLDLPRGEEVTILAQRKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNK
GEVFRVVDTLYNGKLGSWLAIRIGKNHQEVERGIIPNKNRAEQLSSVQYTLPKTPGGDRA
DFWRFRGLRSSKRNLRKSREDLTAQPVQTKFPAYERVVLREAGFLRPVVVFGPIADVARE
KLAREVPDLFELAKTQRPGDGEKSEPRDAGTDQRSSGIIRLHTIKQIIDKDKHAVLDITP
NAVDRLNYAQWYPIVVFLNPDNKQGVKNMRTRLCPESRKSARKLYERALKLRKNNHHLFT
ATINMNNMNEGWYGALKETVQQQQNQLVWVSEGKADGASEDDLDIHDDRLSYLSAPGSEY
SMYSTDSRHTSDYEDTDTEGGTYTDHELDEPLNDEPLIDDVLPRHAPAISRSSEPVVEQP
PPSYDALARIDPAAFKNTPLSHQKADPALPEPAPPAAHLNVALLSSAEGGAGPGADILPP
VPEPSQSEPKIKYGDDPAARTSPGLKQPTVYNPQQPLYQDEPAYGDYDQQPYRYDGPYAE
AKSRNYDSNSHDQWPGYERQGDYSPARPRYGKPSPSPVRHDEAPHTVTPTRYDQEPLHPP
ASRSPEPPKQYYEAAPPPRPTQPRGYVNSDTAPPPKVETLPAEPEPVNKPLPPPPPEAGE
DPAMKPRSVLTRVKMFENKRSVSVDRAKENSDTTLRSVDMVPKPGAASVPKANSLNSLDQ
EKTFRAPEPQQPQSRPSDIVRANHYDPDEDEEYYRKQLSYFDRRSFDTKPPAQTQPQAVS
KPAQPPSQPGNSYPRTESLEKVSPVPQVTPVAPPPCLPKPAVPTPPPEPLSSPKVKPLGR
EDTVQNSYLPQKSFPEKSPVNGTTGAPPPSSSYTRYNIPKPYTASARPFERKFDSPKFNH
NLLPNITTVKAPSSSPAKTQPTGQDGGIDTLTRAPKYQNNNNVNAVPKAIPVSPSALEDD
DDDDMHTVVATARGVFNSNGGVLSSIETGVSIIIPQGAIPEGVEQEIYFKVCRDNSILPP
LDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKNWQ
NKSLPGDPNYLVGANCVSVLIDHF
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccagaaatacatcacggttatgcagatggctatgggagtgaccgcgtccaac
aaagacgattgcatccctccgaaaagacagctgtgggtgccccccagctccgatgctgct
acctcgtctggtccggtgccgcccggggcggcggtgagccaggggaagccgtcgctgcgc
aggatcaagggacgagttcatcgcagcaagagcctggacagcatcgacctgctggactgc
aacagtgcagcgatggaggagacggttatatgggagcagcacacggtgactcttcacagg
gctccaggatttggattcggtatcgccatctcaggaggacgagacaaccctcatttccag
agcggagagacctccatcgtcatctccgacgttctgaaaggaggaccggcagagggactt
ctacatgagaatgaccgagtggtgatggtgaacgcggtctccatggataacgtggagcac
gcctacgccgttcagcagctgaggaaaagcggcaaaaacgccaaaattaccattcggcgt
aaacgcaaagtccagatcccggcggctcgagcgggcgacagggaaaccatgtcggagcgt
gaggaggacacggaggacgaggaattcgccgggccgggcgtcggagccagcgcagggacg
ggcagacgcaacgatcggagcgccagcctgggacggagagaacagagcgtgtccccgcgg
tccgacaggcgctcggtcgcctccgccggcccgccgcgaccctccaaagtcacgctggtc
aaatcacgcaaaaacgaagaatatggactgagactggccagccacattttcgtgaaggac
atcacacccgaaagcctggcagcgcgagacgggaacatacaggagggagacgtcgtgctg
aagattaacggcaccgtgacggagaacctgtccctgacagacgctaagaagctgatcgag
cgctcgaaaggcaagctgaagatggtggtgcagcgagacgagagagccacgctcctcaac
gttcccgacgtagacgacagcgttccttccggcaactcggagcgagacgatatttcagaa
atccattccctcacctccgatcattcccatgagcagttgcgtggcagtcgctctcgctcg
ccggacaagcgctcggatccgtccgacatctccagccagtcgcctcaacagatcagcaac
ggaagccacaggagtcgggatgaggaccgtacctctaagccgccgatcgtgtccactcct
gtgaagctggcggaagacgcgctgctcgtccctgagagcgaggagacagacaagcagatt
cctccacttccggaaccgaagccagtgtacgctcagcccggacagccggatgtcgatctg
cccgtcagtccctccgatgcccccgtccctaacgctgcacatgatgacagcatcctgcga
cccagtatgaagctggtgaagtttaggaaaggagagagcgtgggtctgaggctcgcagga
ggaaacgacgtggggatcttcgtggctggagttttggaggacagtcctgctgctaaagag
ggtctggaggagggagatcagatcctcagggtaaacaatgtcgactttgcaaacatcatc
cgtgaggaagcggtgctgtttctgctggacctgccccgaggagaagaggtcaccatcctg
gcccagaggaagaaggacgtgtaccggcggatcgtggagtccgacgtgggcgactccttc
tacatccgcacgcatttcgagtacgagaaggagtctccgtacggcctgagcttcaacaag
ggcgaggtgttccgggtggtggacacactctacaacggcaagctgggctcctggctcgcc
atccgcatcggcaagaaccaccaggaggtggagaggggcatcatccccaacaagaacagg
gcggagcagttgtccagcgtccagtacactctacccaaaacccccggcggagaccgcgcc
gatttctggaggttccgcggacttcgcagctccaagaggaacctgaggaagagccgggag
gatctcaccgctcagccggtgcagaccaaattcccggcgtacgaacgagtcgtcctcagg
gaagccgggttcctgaggcccgtggtggtgttcgggcccatcgccgacgtcgcccgagag
aaactggcccgagaggtgcctgatctgttcgagctagccaaaacgcagcgccctggagac
ggggaaaaaagcgagccccgagacgcaggaacggatcagcgcagctccggaattatccgc
cttcacaccatcaagcagatcatcgataaggataaacacgcggtgttggacatcaccccc
aacgcggtggacaggctgaactacgcgcagtggtaccccatcgtggtgttcctgaacccc
gacaataagcagggtgtgaagaacatgaggacgaggctgtgtcccgagtccaggaagagc
gccaggaagctgtacgagcgcgccctcaagctgaggaagaacaaccaccacctcttcacc
gccaccataaacatgaacaacatgaacgagggctggtacggtgcgctgaaggagacggtc
cagcagcagcagaatcagctggtctgggtatccgaggggaaggcggacggcgcgtccgaa
gacgatctggacatccatgacgaccgcctgtcgtacctgtcggcccccggcagcgagtac
agcatgtacagcacggacagccggcacacctccgactacgaggacacggacaccgagggc
ggaacctacaccgaccacgagctggacgagccgctgaacgacgagccgctgatcgacgac
gtgctgccgcgccacgctccggccatcagccgctcctcggagcccgtcgtggaacagcct
ccgcccagctacgacgccctcgcgcgcatcgatccggccgccttcaaaaacacgcccctg
tcacaccagaaagcagatcccgctcttcctgagccggcgccccccgctgcacaccttaat
gtagcgcttctgagttcggcggagggcggagccggaccgggggcggacatcttgcccccg
gttcccgagcccagccaatcagagcccaagataaagtacggcgacgacccggcagcacgc
acgagccccgggttaaagcagccaactgtttacaacccccagcagccgctttaccaggac
gagccggcgtacggggattacgatcagcagccgtaccgttacgacggtccttacgccgaa
gccaagtctcgtaactacgactcgaactcgcacgatcagtggcccggatacgagcggcaa
ggcgactacagcccggcgcgaccgcgctacgggaagccgtccccctcgcctgtccgtcac
gacgaagccccgcacacagtcacgcccacgcgttacgaccaggaacccctccatccgccc
gcgtctcgctctccggagccaccgaaacagtattacgaggccgcgcctcccccgaggccc
acccagcctagaggatacgtgaactcggacaccgcgccccctcccaaagtcgagaccctc
ccagcagagccggagccggtaaacaagcccctcccacccccacctccggaggcaggggaa
gacccggcgatgaagccgcggtcggtactgactcgggtgaagatgttcgagaacaagcgc
tcggtgtctgtggaccgcgccaaagagaacagcgacaccacgctaagatccgtggacatg
gtccctaaaccaggagcagcctccgtgcccaaagccaactcgctgaacagccttgatcaa
gagaagaccttcagagcccccgagccccagcagccccagtcgagacccagcgacatcgtt
cgggcgaatcactacgaccccgacgaggacgaggagtactacaggaagcagctgtcctac
ttcgatcgccggagctttgacaccaaaccacctgcacaaacacaaccgcaggctgtgagc
aaaccggcacagccaccgagccagccagggaacagctatcccaggactgagtcactggag
aaggtcagtcccgttccccaggtaaccccagttgctccgcccccttgtctacccaaacct
gctgtgcccactcctcctccagaacctctcagttctcccaaagtcaagcccctgggtcgt
gaggacacggtgcagaactcctacctcccccagaagagtttccccgagaaatctcccgtg
aacggcaccacgggcgctcctccgccctcctccagctacacgcgctacaacatccccaaa
ccttacacggcctcggcgcggcccttcgagcgcaaattcgacagccccaagtttaaccac
aacctcctgcccaacatcaccacggtcaaagcgccgtcgagcagcccggctaaaacgcag
ccgacgggtcaggacggcgggatcgacacgttaacccgcgcgcccaaataccagaacaac
aacaacgtcaacgccgtgcccaaggccatccctgtcagccccagcgctctggaggatgac
gatgatgacgacatgcacactgtcgtcgctacggcgcgaggcgtcttcaactcgaacggc
ggggttttgagctccattgagacgggtgtgagcatcataataccccagggggcaattccc
gaaggtgttgagcaggagatctatttcaaagtgtgtcgggacaacagcatcctgccacca
ctcgacaaggagaaaggtgaaaccctgctgagcccgctggtgatgtgcggtccacatggt
ctgaagttcctgaagccggtggagctgcgtcttcctcactgtgcgtctatgactcctgat
ggttggtcttttgctctaaaatcctccgactcctcgtcgggtgaccccaagaactggcag
aataaatctcttcccggagatccaaactacttggttggagcgaactgcgtgtctgtgctc
attgaccacttctga
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integrated database retrieval system
