Ictalurus punctatus (channel catfish): 108268693
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Entry
108268693 CDS
T04658
Symbol
cacna2d4b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108268693 (cacna2d4b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108268693 (cacna2d4b)
04261 Adrenergic signaling in cardiomyocytes
108268693 (cacna2d4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108268693 (cacna2d4b)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108268693 (cacna2d4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA
VWA_2
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108268693
NCBI-ProteinID:
XP_053538110
Ensembl:
ENSIPUG00000007154
UniProt:
A0A9F7RCI2
LinkDB
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Position
8:complement(18004179..18045592)
Genome browser
AA seq
1094 aa
AA seq
DB search
MGNRTQHSWVTVFLLYSGCLYLLTNAQMKIPPETVQKWADSLSEQLNAVAIKYSGSALLQ
KKLKDVEPIIRIEEVNGIHLAQEFSDEIEKMLGSKMKSVKRLADTVEDADLYHEFNASLE
FDYFNSLLVNTMDEDGNYIELGGEFPLEENEHFNNLPVNTLMSDIQVPTNVYNKDPDILN
GVYMSEALNDVFISNFQKDPTLTWQFFGSSTGFFRLYPGIKWTPDPNGVVAFDCRNRNWY
IQAATSPKDIIIVVDISGSMKGLKLTIAKHTINTILDTLGENDFVNIIAYTDYVQYVEPC
FQGTLVQADLDNREHFRLLVEDLQVKGEGKVKKAMKESFWVLNEATANGQGSLCNQAIML
ITDGAMEDFQSVFEEFNWPERKVRVFTYLIGRDMTFAENVKWIACNNKGYYTHINTLADV
QENVMEYLHVLSRPMVIDHDHDIIWTEAYMDSVLFNSMAQSLLLMTTVAMPVFSKKKETL
SHGILLGVVGTDIPLVEVMMLTPRYKLGAHGYAFLITNNGYILAHPDLRPLYKDGKKLKP
KPNYNSVDLTEAEWEDSNDTLRTSMVKGETGTSMLDVRTAVDRGKRPLFLKNNYFYTTIN
DTPFSFGMVLTQGHGQYMFYGNVSVEEGLHDLQQPDLTIAKEWTYCETDIDPQHRKLTQL
QAVVRYLTGKEPDLECDEVLLQQTLFDAVVTAPLEAYWTALMLSDTGVDDGVETAFLGTR
SGLMRVTRYTGNEQRKGKHFLTAVDKENLFTMDHHPIWYRLAAENKPGQFYYYVPVDDIN
KDKNIFVAVTAVTVTEKKKTALAGAIGVQMSLDLLERRFWATAKQANDTDCSNVDGLCPL
SCQSIDINCYLVDNNGFIVISKERSDVGRFFGEVDGSVMAQLIKSGLFKRVTLYDYQAMC
KNSHHHASAARPLLSPFYSLMAVAKWLFSNFMLFLLEFNICGLWHNDYLVDAKSGYHTTH
KQKKVESMVPCNTEYPGFMYDTSIRETNSIIKCGRCQKMFVLQQVMNSNLVMLVVQADCD
CSRQYSPITLTPREVKYNATVKCNRMKSQKIRRRPESCHAYHPHENAKDCGGACEISISV
ALFFLSLVTSLTLC
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacagaacacagcattcatgggtcacagtcttcctgctttactcaggctgcttg
tacctcctgaccaacgcacagatgaagattccacctgaaacggttcaaaaatgggccgat
agcctttcagaacagctgaatgcagttgctataaaatattcaggatctgcacttctacag
aagaaactcaaagatgtggagcccattatccggatagaggaagtaaatggaattcatttg
gcccaggagttttcagatgaaattgagaagatgctgggaagcaagatgaagtctgttaag
cgactggcagatacagtggaggacgcagatctataccacgagtttaatgcaagcttagag
tttgactatttcaactccctgctggtaaacacgatggatgaggatggcaactacattgaa
cttggtggcgagtttccactggaagagaacgagcattttaacaatctgccagttaacaca
ctaatgagtgacatccaagtcccaaccaatgtgtacaacaaagatccagacattctcaat
ggtgtgtacatgtctgaggctttgaatgacgtcttcatcagtaacttccagaaggacccg
actctcacatggcagttctttggaagctccactggtttcttcagactctatccaggtatc
aagtggactccagacccgaatggagtggttgcatttgactgtcgaaatagaaactggtac
attcaggctgctacgtctccaaaagacattatcatagtggtggatatcagtggcagcatg
aagggcttgaagctcactattgccaaacacaccataaacaccatcctggacactctgggg
gaaaatgactttgtcaacattattgcgtacactgattatgttcagtatgtggagccctgt
ttccaaggcacgctcgtgcaggcggatctggacaaccgggagcattttaggctgcttgtg
gaagacctgcaagtaaagggcgaggggaaagttaaaaaggccatgaaggagtctttttgg
gtgttgaatgaggccacagcgaatgggcagggcagcttgtgcaatcaggccatcatgctc
atcacagatggagccatggaagatttccagtctgtgttcgaggagttcaactggcccgag
aggaaggtgcgggttttcacctacctcatcggccgtgatatgaccttcgcagaaaatgtg
aagtggatcgcctgtaacaataagggttactatactcacattaacacgctggccgatgtg
caggagaacgtcatggagtatcttcatgttctgagtcgccccatggtcatcgatcacgat
catgacatcatctggactgaggcgtacatggacagtgtgctctttaacagcatggctcag
agtctgctcctgatgaccactgtggcaatgcctgtgttcagcaagaagaaagagactttg
tcacatggaattctactgggagtggtgggcacggacattccattagtggaggtcatgatg
cttactcctcgatacaagcttggtgctcacggctatgctttcctcattacaaacaacggc
tacattctggcacaccctgatttaaggcctctatataaagatggaaagaaactcaaaccc
aaaccaaactacaacagtgtggatctgactgaggcagaatgggaagacagcaatgacaca
ttgagaacatccatggtgaaaggtgagaccggtacttcaatgttagatgtaagaactgca
gtggacagagggaaaaggccattgtttcttaaaaacaattatttctacacaaccatcaat
gatacaccatttagttttgggatggtgttaacacagggccatgggcagtacatgttctat
ggaaatgtttctgttgaagagggccttcatgaccttcagcagccagaccttaccatagcc
aaagagtggacctactgtgagacagatattgacccccaacatcgtaaactcactcagctc
caggctgttgtccgatacctgaccgggaaagagcctgaccttgaatgtgatgaggttctt
ctgcaacaaactctgttcgacgcagtggtcacggctccacttgaagcctattggactgca
ctgatgctgagtgacactggcgtggatgatggagtggagacagccttcttggggacacgc
tcaggcctcatgcgtgtcaccagatacactggcaatgagcaacggaaggggaagcacttc
ctaactgcagtggacaaggagaatctttttactatggaccatcaccctatctggtaccgc
ctggcagctgagaacaaaccaggacagttttattactacgtacctgttgatgatatcaat
aaagacaagaacatcttcgtagcagtgactgctgtaaccgtgactgagaagaagaaaaca
gcactggctggagcaattggagtccaaatgtcattagatctacttgaaagaagattctgg
gccacggctaaacaggcaaatgacacagattgcagtaatgtggatgggttgtgtcctctc
agctgtcaaagcatcgatattaactgttacctggtggacaacaatgggttcatagtgatc
tctaaggagagaagtgacgttggaagattctttggggaagtcgacggatcagtgatggct
cagctcatcaaatcgggcttgtttaaaagggtgaccttatacgactaccaggccatgtgc
aagaacagccatcatcacgccagtgcagctcgacccctgctgagtcctttctacagcctc
atggcagtagccaaatggcttttctccaacttcatgctatttcttttggagttcaatatc
tgtgggctgtggcataatgactatctcgtagatgccaagtctggataccacactacacac
aaacagaagaaggtcgagtccatggtgccctgtaacactgaatatcccggattcatgtat
gatacctccatcagggagaccaatagcatcattaagtgtggtcgatgtcaaaagatgttt
gtgctccagcaggttatgaacagtaacctggtgatgctggtggtgcaggcagactgtgac
tgctcacgccagtattctcccatcaccctcactccaagagaagtcaaatataatgcaaca
gtaaaatgcaacaggatgaaatcacagaagatccgcagacgtcccgagtcctgtcatgca
taccatcctcatgaaaatgctaaagactgtggcggagcgtgtgagatttccatatcagtg
gctctcttcttcttatccctggtcacatcactgactctttgctga
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integrated database retrieval system
