Ictalurus punctatus (channel catfish): 108269962
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Entry
108269962 CDS
T04658
Name
(RefSeq) inverted formin-2 isoform X1
KO
K23958
inverted formin-2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108269962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108269962
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
108269962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Drf_FH3
Drf_GBD
WH2
Motif
Other DBs
NCBI-GeneID:
108269962
NCBI-ProteinID:
XP_017331634
Ensembl:
ENSIPUG00000019392
UniProt:
A0A2D0RNV5
LinkDB
All DBs
Position
9:9725238..9769311
Genome browser
AA seq
1282 aa
AA seq
DB search
MSVKSERVQKKWAVLKSHLGSSQDSDSSTQEANLENAEPELCIRLLQVPTVVNYSGLKKR
LEGSDQAWMVQFLELSGLDLLLEALDRLSGRGCSRITDALLQLTCVSCVKAVMNSSIGIH
FIMENEGYVRKLSQALDTSNIMVKKQVFELLAALSMFDSEGYRLALDSLDHYKAVKMQQY
RFSVIMNELQNTDNVHYMVTLLSFINALIFSTEDLRQRDKMRKEFIGLQLLDLLPKLREE
EDEDLIIQCEAFEEAMAEDEEELLRLYGGIDMSNHQEVFITLFNKVSSSPASLQLLSILQ
TLMLLGPERADIWQALEALTNRAVLLAQNSQMDSCETIMQRLIFSKESSTGAHHVDAPPT
KKADKAIQTELNDWEKESLRNIPMTNQAQPLSFTKKPCTTEPPPPPPPPPPLPSLAAPPP
PPPPPPLPGMGGVPPPPPPLPGMGGVPPPPPPLPGVGGVPPPPPPLPGVGGVPPPPPPPL
PGMGAPPPPPPLPGMGMPPPPPPFPGGPPVPPPLPGMPCPPFPPPMGGDIIVAQTFQSLG
RSYSMPVKTGPYPTLRMKKLNWQKLNSKAVTDGCNIWASEQTDSPLVPDYTSIEQLFSLP
VAEPKEKGPVAAAKKEPKEISFIDAKKNLNLNIFLKQFKCSNEDFVDMIQKGDRSKFDVE
VLKQLLKLLPEKHEIDNLNSFQGERDKLANVDKFYLSLLAVPCYQLRIDCMLLCEETASV
LEILKPKAQLVEEACESLRASTLLPSFCRLILRVGNFLNYGSHTGNAEGFKISSLLKLTE
TKANKGRITLLHHILEEAELNHPELLNLPDEIESCEKAAGINLDCIQAEASALSKRLRDT
EKKVLSSVQDVQDQFLSIIKENLRACKGLEDCFADIEKKKGDLAQYLCEDAAQLSLEELF
STIKIFRGLFLKALKENKIRKEQAAKAEKRKKQLAEEESKRQKGENGKIIRRGGVPQEDG
CIIDNLLADIRKGFQLRKTRPRCETESAPSSEMHRDTAQSVKCAEREVTSGVPQDPPPPQ
PKETNLEGPVSASSTNPRGERAATATGNEVPLAHQETQSGLSTERTVSNHTATPLKPSAQ
LPPVQDCLKDNVETPLPTEILSEKNSSTETPLTEKTSVDTRFSTVPPSTVNPSAATDGTQ
QNCNSNNSQVKDDQAFTDTTLKNVTNINSGAHTDSHVEVHGMVSDEMVPESQDQNAKKRS
STTPVDSSRATESSLAGNSNTEMLGEPDAPDGAGAVDGSAPSNPPASRPKSHKLIQGRKK
SNKEAEGNSEGDSKHKKTCVLQ
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaagtccgaaagagtgcagaagaaatgggcggtattgaaaagtcacctgggc
tcatctcaggactcagactcaagcacgcaggaggccaacctagagaatgctgaacccgag
ctgtgcatccgcctgctgcaggtgcccaccgtggtcaactactctggcctgaaaaagcgg
ctggagggcagtgatcaggcatggatggtgcagtttctcgaactgtcaggcctcgacctg
ctgttggaggccctggaccgtctctcaggtcgcggctgctcacgcatcaccgacgcactg
ctccagctcacctgtgtcagctgtgtcaaagctgtaatgaactcatccatagggatccat
ttcatcatggaaaatgagggttatgtgcgtaagctctcacaagctctggatacatccaat
atcatggtgaagaagcaagtgtttgagctgctggctgccctcagcatgtttgattcagaa
ggatacagattggcgctggactctctggaccattataaggctgtaaagatgcagcagtac
cgcttcagtgtgatcatgaatgaactgcagaacacagataatgtgcactacatggtgacg
ctactgagcttcatcaacgcgctcatcttcagcacagaagacctgcgccaaagggacaag
atgcgcaaagaattcatcggtttacagctgcttgacctcctgccgaagctgcgagaggag
gaggatgaagacttgatcatccagtgtgaggcgtttgaggaagccatggctgaggacgag
gaggaactgttgaggctttatggaggcattgatatgagcaatcaccaggaagtcttcatc
actctgtttaacaaagtgagtagctcccctgcatcgttgcagctgctgtccatcttacag
actctgatgttgttaggaccagagcgagcagacatctggcaggccctggaggctcttact
aaccgtgcagtcctcctggcccagaactctcaaatggactcctgcgagacgatcatgcag
cggcttattttttccaaagaatcctccactggtgctcatcatgtagatgctccacctaca
aagaaagcagataaagcaattcagaccgagttgaatgattgggagaaagaatctttaaga
aatatacccatgaccaaccaagcacagcccctcagcttcacaaagaagccctgcaccacc
gagcctcctccaccgcctcctcctccacctccattacccagtttggctgcaccacctcct
cctcctcctcctccacctttaccaggcatgggtggtgttccacctccaccaccaccttta
ccaggcatgggtggtgttccacctccaccaccacctttaccaggcgtgggtggtgttcca
cctccaccaccacctttaccaggcgtgggtggtgttccgccaccacctccaccaccttta
ccaggcatgggtgctcctcctcctcctccacctttacctggcatgggaatgccaccacca
cctccacccttccctggaggtcctccagtaccacctccactccctggcatgccatgccca
cctttcccacctcctatgggaggagatataatagtagcccagacttttcagtcactaggg
agatcttacagcatgccagtgaagacgggtccatatcccacgcttagaatgaagaagctc
aactggcagaagctaaactccaaagcagtcactgatggttgcaatatttgggcctcagaa
caaacagattcccctctggtacctgactacactagcatcgagcaacttttcagtctccca
gtggctgagcccaaagagaaaggaccagttgctgctgctaagaaagaacccaaagaaatt
tcctttattgatgccaagaagaatctgaatctgaatatatttctcaagcagttcaaatgc
tctaatgaggactttgtggacatgattcagaaaggggatcgttccaagtttgatgtcgag
gtgttaaaacagctactgaagctccttccagagaaacacgagatcgacaacctgaactct
ttccaaggagaacgagacaagcttgccaacgtcgacaagttttacctatcgctcctcgct
gttccctgctatcagctgaggattgattgcatgctgttgtgtgaggagactgcgtctgta
ttggagattctgaaacccaaagcacagctggtggaggaggcttgtgagagtctcagagct
agcacactgctgcccagtttctgcaggttaatccttcgagtaggaaacttcctcaactat
ggaagtcatacaggaaatgctgaaggattcaagattagctccttgctgaagctgacagaa
accaaagccaacaagggccgtatcactctgttgcaccacatcctcgaggaagccgagttg
aatcaccctgagcttctgaacctccctgacgaaattgaaagctgtgaaaaggcagcagga
ataaacctagattgcattcaggctgaggcaagtgcactgtccaagcgtttaagggacacc
gagaaaaaagtcttgtcatcagttcaagatgttcaagatcagtttttaagtattatcaag
gagaaccttcgggcatgtaaaggtttggaggattgctttgcggacattgagaagaagaaa
ggagatctggctcagtacctgtgtgaagatgctgctcagctgtcactagaggagctcttt
agcaccattaagatcttccgtgggcttttcctcaaagcattaaaggagaacaagatccgt
aaggagcaagctgccaaggcagagaagaggaaaaagcagctggcagaggaggagtccaag
cgacagaaaggagagaacggcaagatcattagaagaggaggtgtgcctcaggaggatggc
tgcatcattgacaacctgctagctgacatcagaaaaggtttccagcttagaaagaccagg
cccaggtgcgaaacggaaagtgccccctctagtgaaatgcatagggacaccgcacaaagt
gtcaaatgtgcagaaagagaagtcacgtcaggtgtacctcaagacccccctcctcctcag
ccaaaggaaacaaatctcgaaggtccagtcagcgcttcctccaccaaccccagaggagaa
agagcagccacagcaactggtaatgaagttccactcgcacatcaagagacccaatcaggc
ctctccaccgaacgcacagtgtctaaccatacagctacaccgctcaagccttccgcacag
cttcctccagttcaggattgcttaaaagataacgtagaaactcctcttccaactgaaatc
cttagtgagaaaaactcttccacagagactccactgacagaaaagacctctgtggacaca
cgattctctacagtgcctccatctactgtgaacccatctgcagcaacagatggcacacaa
caaaactgtaactctaataacagccaagtcaaagacgaccaagcttttactgataccaca
ctcaaaaacgtgaccaatatcaactctggtgctcatactgactcgcatgtggaagtacac
ggcatggtcagtgatgaaatggtgccagaaagccaagaccagaatgcaaagaaacgctca
agcacaactccggtagactctagccgcgccacagagtcatctcttgctggtaacagtaat
acagagatgctgggtgagcctgatgcacctgacggagcaggtgctgtggatgggtctgcc
ccctcaaatcctcccgcctctcggccgaaatcacataagctcatccaaggaaggaaaaaa
agcaataaagaagctgagggtaacagcgaaggagacagtaagcataaaaagacctgtgtg
ttgcaataa
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