Kryptolebias marmoratus (mangrove rivulus): 108237228
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Entry
108237228 CDS
T05608
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108237228 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108237228 (raraa)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108237228 (raraa)
Nuclear receptors [BR:
kmr03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
108237228 (raraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108237228
NCBI-ProteinID:
XP_017274011
UniProt:
A0A3Q3ABQ0
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Position
LG17:complement(13409794..13563373)
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTTNSSERRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALK
IYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagagtgtggacgttgtgggactgaatcccagcccgaacccgtttctaatg
atggattactacaaccagagcagaggatgcctgatcccagagaaaggactggtgcccggt
gcgccgcatccctacagcacgtccatcaggaaccagcactggaacggatccaatcactca
atagaaacccagagtaccagttcagaggagatagtgccaagcccgccctcgcctcccccg
ccaccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggcttctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgagagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggttacagaagtgcctggaagtcgggatgtctaaagagtccgtgaggaac
gaccggaacaagaagaagaaggaagagaagaagcaggagtgcacggagagctacgtgctg
agtccggacacggagcagatgattgacagggttcgcaaggcgcaccaggacaccttcccc
tccctctgccagctgggcaaatacactacgactaacagctcagaaaggcgcgtgtccttg
gacattgacctgtgggataagttcagcgagctctccaccaagtgcatcataaagacggtg
gagttcgccaagcagctgccgggattcacaacgctcaccatcgctgaccagatcactctg
ctcaaagccgcctgtctggacattctgatactgcggatctgtacgcgctacacaccggag
caggacaccatgactttctcagatgggctcacgctaaacagaacccagatgcacaacgct
ggcttcggccccctcacagacctggtttttgcctttgccaaccagctccttcccctggag
atggatgatgcagagacggggctgctcagcgccatctgcttgctgtgtggagatcgacag
gacttggaggaagcggacaaagtggacgtcctgcaggagcccctcctggaggcgctgaag
atttacgtaagaaggaggcggccccacaaacctcatatgtttcccaagatgctgatgaag
ataacggacctgagaagcatcagtgctaaaggagctgagcgcgtcatcacgctgaagatg
gagatccccggctccatgccaccgctcatccaggagatgctggagaactccgagggtctg
gaaagcggggccgcaggcggcaggcccagcggcgcccccccaggcagctgcagtcccagc
ctgtcccccagctctgcccaaagcagtccagccacacaatcgccgtag
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