Kineococcus radiotolerans: Krad_1410
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Entry
Krad_1410 CDS
T00562
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
kra
Kineococcus radiotolerans
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kra03016
]
Krad_1410
Enzymes [BR:
kra01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Krad_1410
Transfer RNA biogenesis [BR:
kra03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Krad_1410
Prokaryotic type
tRNA splicing ligases
Krad_1410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ABS02898
UniProt:
A6W7V9
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All DBs
Position
complement(811386..812555)
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AA seq
389 aa
AA seq
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MERINGKLVNWASILEEKTRRQAETASTMPFIHPHIALMPDAHLGKGATVGSVIPTDGAI
IPAAVGVDIGCGMIAVRTQFRAGDLAGRDLSVLREAIERSVPLSAGAANRDVSATAQPRV
AELEALHPERAGFREALAPKWRTALGTLGSGNHFIEVSLDETGAVWLFLHSGSRGPGNKL
ASHHIAVAQRLCAQWFVDLPDRDLAYLVEGTAEFDDYVADLRWAQHFALLNREEMMDRVA
ARLSDFLGEPVQEQERINCHHNYTERERHFGREVWLSRKGAIRADAGRPGLVPGSMGTAS
YVVVGKGNRLALDSSPHGAGREFSRSAARRTFTREQLREAMRGIEYRDTDAFLDEIPAAY
KDIDRVMADAADLVEIRHTLRQVVNVKGD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtggagcggatcaacggcaagctggtgaactgggcgtcgatcctggaggagaagacgcgc
cggcaggccgagaccgcctccaccatgccgttcatccacccgcacatcgccctcatgccc
gacgcccacctgggcaagggggcgacggtcggctcggtcatcccgaccgacggcgcgatc
atcccggccgcggtcggggtggacatcgggtgcgggatgatcgcggtccggacgcagttc
cgggccggggacctcgccggccgcgacctgtcggtgctgcgcgaggcgatcgagcgcagc
gtgccgctgtcggccggagcggccaaccgcgacgtctcggccaccgcgcagccgcgggtc
gccgagctggaggccctgcaccccgagcgcgcggggttccgcgaggcgctggcgccgaag
tggcgcaccgcgctggggacgctcggctccggcaaccacttcatcgaggtgtccctcgac
gagaccggggcggtctggctcttcctgcactccggctcgcgcgggccgggcaacaagctc
gcgagccaccacatcgccgtcgcgcagcggctgtgcgcgcagtggttcgtcgacctgccc
gaccgcgacctcgcctacctggtggagggcaccgcggagttcgacgactacgtggccgac
ctgcgctgggcgcagcacttcgccctgctcaaccgcgaggagatgatggaccgcgtcgcg
gcccgcctctcggacttcctgggggaaccggtgcaggagcaggagcgcatcaactgccac
cacaactacaccgagcgcgagcggcacttcggtcgcgaggtgtggctgtcgcggaagggc
gcgatccgcgccgacgccggccgccccggcctcgtgccggggtcgatgggcacggcgagc
tacgtcgtggtgggcaagggcaaccggctggcgctggactcctcgccccacggggcgggg
cgggagttcagccggtccgcggcgcgccgcacgttcacccgcgagcagttgcgggaggcc
atgcggggcatcgagtaccgcgacaccgacgcgttcctcgacgagatcccggccgcctac
aaggacatcgaccgggtcatggccgacgccgccgacctggtggagatccggcacaccctg
cgtcaggtcgtgaacgtcaagggggactga
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