Lates calcarifer (barramundi perch): 108881036
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Entry
108881036 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like
KO
K13365
sodium/hydrogen exchange regulatory cofactor NHE-RF1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108881036
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108881036
Transporters [BR:
lcf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
108881036
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EBP50_C
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108881036
NCBI-ProteinID:
XP_018528321
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All DBs
Position
LG11:complement(14036551..14062517)
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AA seq
414 aa
AA seq
DB search
MPSKSQYLRPRLCTLEKGDNGYGFHLHGEKGKTGQFIRLVEPDSPAETSGLRAGDRLVFV
NGEDVENESHQQVVSRIRATVGRLELIVVDPDTEQLLKKHNMKCLKEYVADGVPLPFDEE
EEEEEEERGEKEKEREEVXVVVVEEVREVDGTENGKRDEVDGEEVEVEVVAGEEQELTPR
ESTPAPQSNGEIHEHVENKLNINSEKEVCTGLRPRLCVIQRGSNGYGFNLHSERARPGQY
IRAVDEDSPAERAGLLAKDRILQVNGVSVEGKTHSEVVAAIKAGGSETRLLVVDPDTDAF
FKRCRVAPTSDHLTGPLPEPVINGGMEEKVNGRGAKEAERDSKLSVSPSPSNASSNTSLT
TPPTNTPPEGLIADAIPALNLTLQQVKELAHQKRSNKRAPPMDWTKKNELFSNL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaaaagccagtatctgcgcccccggctgtgtacgctggagaagggggacaac
ggctacggcttccacctccacggggagaaaggtaagacagggcagtttatccggttggta
gagcccgacagcccggcggaaacctcggggctccgcgccggagaccgactggtgttcgtg
aacggggaggacgtggagaacgagagtcaccagcaggtcgtgtcccgaatacgggccacc
gtgggccgactggagctcatagtggtggacccggacacggagcagctgctgaagaaacac
aacatgaagtgtctgaaggagtacgtcgccgacggtgtcccgttacccttcgacgaagaa
gaggaggaggaggaggaggagaggggggagaaagagaaggagagggaagaggtgnnggtg
gtggtggtggaggaggttagggaggtagacgggacggaaaacgggaagcgggacgaggtg
gacggggaggaggtggaggtggaggtggtggccggggaggagcaggagctgacgcccagg
gagtccacgccggccccgcagagcaacggagagatccacgagcacgtcgagaataagctg
aacatcaactctgagaaggaggtgtgcaccggactgcggccacgtctgtgcgtgatccag
cgagggtccaacggatatggcttcaacctgcacagcgagcgggcgcggccgggccagtac
atcagagctgtggatgaagactctccagcagagagggcaggcctgctggccaaggacagg
atattacaggtgaacggtgtgtcagtggaggggaagacgcattcagaagtagtggcggcc
attaaagctggcgggagcgagacccggctgctggtggtggaccccgacacagacgccttt
ttcaagaggtgccgagtggcccccacctcggaccacctgactggtccgctgccagaacct
gtcattaatggaggaatggaggagaaggtgaatggtagaggggccaaagaggcagagagg
gactcgaagctgtcggtgagtccctctccatccaacgcctcatccaacacatcgctcaca
accccgccaacaaacaccccgcctgagggtttgatcgcagatgccatcccagctctcaac
ctaaccctccagcaggtcaaagagctcgcccaccagaaacgctccaacaagagagccccg
cccatggactggaccaagaaaaatgagctcttcagcaacctatag
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