Larimichthys crocea (large yellow croaker): 104933373
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Entry
104933373 CDS
T04659
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104933373
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104933373
04261 Adrenergic signaling in cardiomyocytes
104933373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104933373
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104933373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
dCache_1
VWA_2
VWA
CobT_C
VWA_CoxE
ArsR
Motif
Other DBs
NCBI-GeneID:
104933373
NCBI-ProteinID:
XP_019123186
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Position
XXI:complement(746168..859944)
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AA seq
1106 aa
AA seq
DB search
MLGVESRMEGRVPRRRKLLGILGFLCLWITAQAQMKIPPETVQQWASVFSVELQEFTTKY
SGSLLLQKKLKDVEPIIKIVEVDGNDLVKDYSDEIERMLGSKMKSVKRLAESAEDADLYH
EFNASLQFDYFNSMLINTVDDDGNNVDLGGEFPLEENEHFNNMAVNTQQSDIQIPTNVYN
KDPNILNAIYNSEALNDVFIGNFQKDPTLTWQYFGSSTGFFRIYPGIKWTPDSNGVAAFD
CRNRNWYIQAATSPKDIIIMVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDY
VRYVEPCFKGTLVQADLDNREHFKQLVEDLHVKGEAKIKHAMKESFKILNEARANGQGSM
CNQAIMLITDGAMEDFESVFEEFNWPERRVRVFTYLIGREMTFAQNTKWIACNNKGYYTH
ISTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLPNTKELFTTKAQSLLLMTS
VAMPVFSKKKETLSHGILLGVVGSDVPLMEVMKLAPRYMLGAHGYAFLITNNGYILAHPD
LRPLYKYGKKLKPKPNYNSVDLSEVEWEDTEEKLRTAMVRGETGSSSLSIRASVDKGKRP
LFLINDYYYTNIDETPFSFGMVLTRGHGGLMFLGNVSVEEGLHDLTSPDLTIASEWTYCE
TDIDPGHRKYTQLQAAIRYLLGKEPDLECDEVLLQQTLFDAVVTAPLEAYWNALMLNDRV
EPGVETVFLGTRSGLMRVVRYAGVESRVAKKFLTPADKDNLYTIDHFPLWYRLAVENTPG
SFYYYPVNDKGVKYIIATTAVTVSSKGKTAMAGAIGVQLSLDWLEKRFWAIAKQPSDTDC
SNIEGVCPLSCESVDLNCFLVDNNGFILLSKERNEVGRFFGEVDGSVMASLIKMGMYKKV
SLYDYQAMCKNNHHHHNSARPLLSPFYVITALIRWFFSNVLMFLLDFNLCGLWHSDYFVD
AKAGYHTSHRQKKVEPMQPCDTAYPGFMYDSSIREANSLIKCGRCQKMFVVQQIPNSNLV
LVVTQADCDCSRQYGSILLEPKEIKYNATVKCNRMKSQKVRRRPESCHAYHPKEDAKECG
GVAVISLSLSLFSSSLLASLLLHCWT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagttgaaagcaggatggagggcagggtgcccagaaggaggaagctcctgggg
attctgggatttttatgcctgtggattacagctcaggctcagatgaagatcccaccggag
acagtgcagcagtgggcgtctgtgttctctgttgaacttcaagagttcaccaccaaatac
tccggctcgctgctgctacagaagaaactgaaggatgtggagcccatcattaagatcgtg
gaggtggacggaaacgacttggtgaaggattactctgatgaaattgaacgaatgttggga
agcaagatgaagtcagtgaagaggttggcagagtctgcagaggatgctgatctttaccat
gaattcaacgcttcgctacagtttgattactttaactccatgctgatcaacacggtggat
gacgatgggaacaacgtggacctgggtggagagtttccactagaggagaacgagcacttc
aacaacatggctgtgaacacgcagcagagcgacatccagattcccaccaacgtctacaac
aaagatccgaacatcctcaacgccatctacaactctgaagcattaaacgacgtctttatc
ggtaacttccagaaggacccgacactcacctggcagtacttcggcagctctactggcttc
ttcagaatctaccctggtattaaatggactccagactccaacggtgtggcagcttttgac
tgcagaaacagaaactggtacatccaggcggccacgtctcccaaagacatcatcatcatg
gtggacatcagtggcagcatgaaggggctgaagatgaccatcgccaaacacaccatcaac
accatcctggacacactgggagagaacgactttgtcaacgtcatcgcttatacagactac
gttcggtatgtggagccgtgcttcaaaggaactctggtccaggctgacttggacaacaga
gagcactttaagcagctggtggaggacctgcatgttaaaggagaagccaagatcaaacac
gccatgaaggaatcctttaaaatcctcaacgaggcgagggcgaatggtcagggcagcatg
tgtaaccaggccatcatgctgatcacagatggagccatggaagactttgagtccgtcttt
gaggagttcaattggcctgagcgcagggtgcgagtcttcacctacctgattggcagagag
atgaccttcgctcaaaacaccaagtggatcgcctgcaacaacaaaggttactacacacac
atctccacgctggccgacgtgcaggagaatgtcatggagtacctgcacgtgctcagccga
ccaatggtcatcaaccacgaccatgacatcatttggacagaagcctacatggacactgtg
cttcccaacaccaaggagctcttcaccaccaaagctcagagtctgctgctgatgacctcc
gtggccatgccagtcttcagcaagaagaaggaaacgctctcccacggtatcctactgggt
gtggtcggctctgacgttccactgatggaggtgatgaagctggcgcccagatacatgctg
ggcgctcacggctacgccttcctcatcaccaacaacggttacatcctggctcaccctgac
cttcgacctctgtataaatatggaaagaaactgaagccgaagccaaactacaacagtgtg
gatctgtctgaggtggagtgggaggatacagaggagaagctgagaactgccatggtgagg
ggagagacaggcagcagcagcctgagcatcagagcatcagtggataaagggaaaagacct
ctgttcctcatcaatgactactactacacaaacattgatgaaacacctttcagcttcggc
atggtactgacgaggggtcatggagggctgatgtttttaggaaatgtgtctgtggaggaa
ggcctgcatgatctcacctccccagacctcaccatcgcctccgagtggacttactgtgag
acggacatcgaccccggccaccgaaaatacactcagcttcaggccgcgatccgctacctg
ctgggaaaggagcccgacctggagtgtgatgaggtgttgctgcagcagactctgtttgac
gccgtggttacggctccactagaagcctactggaacgccctaatgctcaatgacagggtg
gagccaggagttgagacagtcttccttggtactcgttctggcctgatgagggtcgtgaga
tatgcaggagtggagtccagagtggcaaaaaaatttctgactccagctgataaagacaac
ttgtacaccattgatcacttccctctgtggtaccgcctggctgtggaaaacactcctgga
agcttctactactaccccgtcaacgacaaaggagtgaagtacatcatagcaacgacagca
gtgacagtgtcctctaaaggaaagacggccatggctggagctatcggggtgcagttgtcc
ttggattggctggaaaagaggttctgggccatcgccaaacagcccagtgacacagactgc
tccaacatcgaaggcgtgtgtcctctcagctgtgagagtgttgatctgaactgcttcctg
gtcgacaacaacggcttcatcctgctgtccaaagagaggaacgaggttggtcgtttcttt
ggcgaggtggacgggtctgtcatggcgtcgctgatcaagatgggaatgtacaaaaaagtg
tcgttgtatgactaccaggcgatgtgtaagaacaatcatcatcaccacaacagcgctcga
ccactgctcagcccgttctatgtcatcacagcactgataagatggttcttctccaacgtg
ctcatgttcttgctggactttaatctctgtggtctctggcactctgattattttgtggat
gccaaggctggctaccatacaagtcacaggcagaagaaggtggagcctatgcagccctgc
gacacggcatatcccggcttcatgtacgactcatccatcagagaagccaacagtctcatc
aagtgtggacgctgccagaagatgttcgtagtgcagcagattcccaacagtaacctggtc
ctggtcgtgactcaggcagactgtgactgttctcgtcagtatggatcgatcctgctggag
cccaaagagatcaaatataacgccacagtgaagtgcaacaggatgaaatctcaaaaggtg
cggcggcgtccggagtcctgccacgcctaccacccaaaggaagatgctaaggagtgcggc
ggggtggcggtcatctccctgtcactgtcgctcttctcttcctctctgcttgcgtcgctc
ctcctccactgctggacgtaa
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