Larimichthys crocea (large yellow croaker): 104935789
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Entry
104935789 CDS
T04659
Name
(RefSeq) retinoic acid receptor alpha-B
KO
K08527
retinoic acid receptor alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104935789
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lco03310
]
104935789
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104935789
Nuclear receptors [BR:
lco03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
104935789
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104935789
NCBI-ProteinID:
XP_010749985
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Position
XII:10331599..10350582
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AA seq
491 aa
AA seq
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MYESVDVVGLSPSPSSPSPGSFLSMDYYHRPPGLGPEKGLLSGVGGLQRPFGGSLVSGRH
WSGSSHSIETESTSSGEDLLVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGF
FRRSIQKNMAYTCHRDKVCVINKVTRNRCQSCRLQKCLDVGMSKELVRNDRMKKKKEEKR
QGETEIYVLSADTEQMIERIRRAHQDTFPSLCQLGKYTTNNSSEHRVSLDVSLWDKFSEL
STKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLT
LNRTQMHNAGFGPLTDLVFSFANQLLPLQMDDAETGLLSAICLLCGDRQDLEESDKVDVL
QEPIVEALKIYVRRRRPDKPCMFPKILMKITDLRSISVKGAERVITLKMEIPGSMPPLIQ
EMLENSEGLEGHGAGGGKGGGGGGKGRGGGGSREEEETELGSCHPSPSPKSVPSSSPSPA
PCSPSSPSLST
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaagcgtggatgttgtgggtctcagccccagcccaagcagcccaagtcccggc
tcttttctcagcatggactactaccacagacctccggggctcgggccggagaagggactt
ctgtccggtgtaggaggactccagcgtccgttcggagggtccctggtgagcggcagacac
tggagcggatccagccactctatagagacggaaagcacgagctcaggagaggacctgctc
gtccccagtcccccctcacctccacctccgccgcgcatctacaagccctgcttcgtatgt
caggataaatcttcaggataccactacggagtcagtgcctgtgagggctgcaagggtttc
ttccggaggagcatccagaagaacatggcgtacacgtgtcacagagacaaagtctgcgtc
ataaacaaggtgacgaggaaccggtgtcagtcctgccgactgcagaaatgcctcgacgtt
ggcatgtccaaagagctggtgcgaaatgacagaatgaagaaaaagaaggaagagaagagg
caaggcgaaacggagatctacgttctgtccgcagacacggagcagatgattgagcgaatt
cgccgagcccatcaggacacatttccctccctgtgtcagctgggaaaatacaccacgaac
aacagctccgagcaccgcgtctctctggacgtcagtctttgggacaagttcagcgagctg
tccactaaatgcatcattaagacggtggagttcgccaagcagctgccgggcttcacgacg
ttaaccatcgctgatcagatcaccctgctcaaagccgcctgcctcgacatactgattcta
aggatctgcacccgctataccccagaccaggacactatgaccttctccgacgggttgact
ctgaaccgcacccagatgcacaacgctggctttggaccgctcaccgacctggtgttctcc
ttcgccaaccagctgctcccactacagatggacgacgcggagacgggattgctcagcgcc
atctgcctgctctgtggagaccgtcaagatctggaagagtcagacaaggtggatgttctt
caggagccaattgttgaagccttgaagatctatgtgaggaggaggcgacctgataaaccc
tgtatgtttcccaagatactgatgaagattaccgacctcaggagcatcagtgtaaaggga
gcagagcgagtgatcacactgaagatggagatccccggctccatgcctcctctcattcag
gagatgctagagaactctgagggactggaggggcatggagctgggggaggaaagggagga
ggcggaggaggaaaaggtagaggaggaggaggaagcagagaagaggaagaaacagagctc
ggaagctgtcatccaagtccatcacctaaatcagttccctcctcaagcccaagcccggcg
ccctgctcgccatcttctccctccctctccacctga
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