Marinobacter adhaerens: HP15_2222
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Entry
HP15_2222 CDS
T01922
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mad
Marinobacter adhaerens
Pathway
mad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HP15_2222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mad03019
]
HP15_2222
03009 Ribosome biogenesis [BR:
mad03009
]
HP15_2222
Enzymes [BR:
mad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
HP15_2222
Messenger RNA biogenesis [BR:
mad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HP15_2222
Ribosome biogenesis [BR:
mad03009
]
Prokaryotic type
rRNA processing factors
HP15_2222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ADP97986
UniProt:
E4PFR6
LinkDB
All DBs
Position
2338705..2341929
Genome browser
AA seq
1074 aa
AA seq
DB search
MLINATHPEELRVALVDGQRLFDLDIESSSREQKKANIYKGRITRVEPSLEAAFVDFGAE
RHGFLPLKEISKEYFKKSPGQIEGKINIKDVVSEGQEVIVQVDKEERGNKGAALTTFISL
AGRYLVLMPNNPRAGGISRRIEGDERAQLKEAMNDVQVPKSMGIIVRTAGIGRTTEELQW
DLDYLVQFWEAITQAAGERKAPFLIHQESNVIIRAVRDYLRQDIGEVLIDANGVYEDVLN
FVRAVMPTFENKIKLYKDEIPLFSRYQIEGQIETAFQREVKLPSGGSIVIDPTEALVSID
INSSRATKGQDIEETALQTNLEAAEEIARQLRLRDMGGLIVIDFIDMTPAKHQREVEQKM
REALEIDRARVQVGKISRFGLLEMSRQRLRPSLGETRSEVCPRCEGQGTIRGIESLALSI
MRLIYEESSKDKTGEVRAVVPVSVATFLLNEKRKQLADIEARQEVSVVVVPVPHMETPHF
EIIRMRQDETTPEHISSHQVAQEYSEREEEIFEAPTPEKPVREQAAVKAIRPSAPAPAPA
PAAPKADETTEQEEGLFRRLGRKIAGFFSGEEEQKVENREQSQSQREDRRNQGRQDRRKS
RVARGDDQRAGGNRSGNERRQGGQQGRGDDNRGRGRNRNDDQNRGNQNRQASENKGQDNR
GGDNKSADNKGSENRRDNRRDNQGRGRNRPQRDPKDNREQKDQKDQGQQDNAAKSGPADK
TGSEEKRRKPRRQRNRDGSPSEAPASAPADRKAARSEKHQKDTQPENGRDDAKPEVKAEQ
VKETVNKASDKPETSAETAPAASEAPKPEAAQKEPAKEQKPEKASADKAPSESKPEAKPA
AETKPAADSPVEKQEAVQAKPEKAEPAKAEQSSEPLEKPEEKSEKVTGQAQGAATDKEPA
KSTAATDEPKPVTDQAPEKKEAAPRPKPESRATADGEQAPRAKKQPAKPKEAPAAKTEPE
EAPQPEKAEKPAEEKVAPERKAPEAQPEPKQPEAAQASPEKAEPKKAEPEKVEPKTAEPV
KEETPSAPEATAKDTPADAPAVDVPVTPGRAYNDPREVRKRQKAAEEAKKAGSN
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcaatgcaactcatcccgaagagttgcgcgtcgccctggttgacggccagcgt
ctattcgaccttgatatcgaatccagctcccgcgagcagaagaaagccaatatctacaag
ggccgcattacccgggtcgagcccagtctcgaggccgcgtttgtggatttcggcgccgag
cgccacggctttctgccgttgaaggaaatttccaaggaatacttcaagaagtcgcccggc
cagatcgaaggcaaaatcaacatcaaggacgttgtttccgaaggccaggaagtaattgtg
caggtcgacaaggaagagcgtggcaacaagggcgcagccctgaccacgtttatctccctg
gcaggtcgctatctggtactcatgcccaacaacccccgtgccggcggcatctcccgtcgc
attgagggcgatgagcgggcgcagctcaaagaagcgatgaacgatgttcaggtgccgaaa
tccatgggcatcatcgttcgtaccgccggcatcggccgtaccactgaagaactccagtgg
gatctggactacctggtgcaattctgggaggccatcactcaggccgccggcgagcgcaag
gcacccttcctgattcaccaggaaagcaacgttatcatccgtgcggtccgtgactacctt
cgccaggacatcggcgaggttctgattgacgctaatggcgtctatgaggacgtcctgaat
ttcgttcgtgcggtcatgcccaccttcgaaaacaagatcaagctgtacaaggatgaaatc
ccgctgttcagccggtaccagatcgaaggccagatcgagaccgccttccagcgggaagtg
aaattgccctccggcggctccatcgtgattgacccgaccgaggccctggtttccatcgac
atcaactcttcccgcgccacgaaaggtcaggatatcgaggaaaccgcgctccagaccaac
ctggaagcggcagaggaaatcgcccgccagctgcgcctgcgtgacatgggcggcctgatt
gtcatcgactttatcgacatgacgcctgcgaagcatcagcgggaagttgaacagaagatg
cgtgaggccctggaaatcgaccgggcccgggttcaggtgggcaagatctcccgcttcggc
ctgctggaaatgtcccgtcagcgcctgcgcccctccctgggagagacacgcagcgaagtg
tgcccccgatgtgaaggtcagggcaccattcgtggcatcgagtccctcgccctgagcatc
atgcgcctgatctacgaagaatcgtcaaaggataagaccggcgaagtacgagccgttgtg
cccgtttctgtcgccactttcctgctcaacgagaagcgcaagcagctggccgacattgaa
gcccgccaggaagtgagcgttgtcgtggtgccggttccgcatatggagacaccgcatttc
gaaatcatccggatgcgtcaggatgaaacaacgccagagcacatttccagccatcaggtg
gcccaggagtacagcgagcgtgaagaagaaatcttcgaggcgccgacccctgagaagccg
gtacgcgaacaggctgcggtaaaagcaatccggccgagcgcacccgcacccgcgcctgcc
ccggccgcaccgaaggctgatgaaaccactgaacaggaagaaggcctcttccgccggctg
ggacgcaagatcgctggtttctttagtggcgaagaagaacagaaagtcgagaatcgcgag
cagagccagagccagcgcgaagatcgtcgcaaccagggccgtcaggaccgtcgcaaatcc
cgggtagcccgcggcgatgaccagcgtgcaggtggcaaccgcagtggcaacgaacgtcgc
cagggcggccagcagggccgtggtgacgacaaccgtggccgcggccgcaaccgcaacgac
gaccagaaccgtggcaaccagaatcgccaggcatccgaaaacaaaggccaggataatcgc
ggaggcgacaacaagagcgccgataacaaaggctctgaaaatcgtcgtgacaaccgtcgc
gacaaccagggccgcggccgcaacaggccccagcgcgacccgaaggataatcgcgagcag
aaggaccagaaggatcagggccagcaggataatgcagccaagtccggtccagcggacaag
accggttcagaagagaaacgcagaaagccacgtcgccagcgcaaccgcgacggctctccg
tctgaagcaccggcgtccgctccggctgatcgaaaagccgctcgtagcgagaagcatcag
aaggacacgcagccggaaaacggtcgtgacgatgccaagcccgaagtgaaagccgagcag
gtaaaggaaaccgtcaacaaagcgtctgacaagcccgaaaccagcgctgagactgcgccg
gcagccagcgaagcaccgaaaccggaagctgctcagaaagagccggcaaaagagcagaag
cccgagaaggcatccgcagacaaagcgccgtcggagagcaagccggaagcgaaaccggca
gcggaaacaaaacccgctgcagatagcccggttgaaaagcaggaagctgtccaagcgaaa
cctgaaaaagccgagcccgccaaggctgaacaaagctccgaacccctcgagaagcctgag
gaaaagagcgaaaaagttaccgggcaggcgcaaggcgcagccacagacaaagagcctgcc
aagagcaccgcggccactgatgagccaaagccggtgactgaccaggctcccgagaaaaaa
gaggcagctccgaggccaaagccggagtccagggccacagccgacggtgaacaagcgccg
cgggcgaagaagcagccggcgaagcccaaggaagcgccagccgccaagacagaaccggag
gaggcaccacaacccgagaaggctgaaaagccagcggaggagaaggtagcaccagagcgt
aaggctcccgaggctcaaccggagccaaagcagccggaagcagcgcaggccagccccgaa
aaggccgagcccaagaaagccgagcccgaaaaagttgagcccaaaaccgcagagccagtg
aaggaagagacgccttccgctccggaggcaacggccaaggacacgcctgccgatgccccg
gcagtcgacgttcctgtaacaccgggccgcgcttacaatgatccaagagaagtccgcaag
cgccagaaggccgcggaagaggccaaaaaggccgggagtaactaa
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