Mugil cephalus (flathead mullet): 125021988
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Entry
125021988 CDS
T08342
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125021988 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcep03310
]
125021988 (raraa)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125021988 (raraa)
Nuclear receptors [BR:
mcep03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
125021988 (raraa)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125021988
NCBI-ProteinID:
XP_047464174
EnsemblRapid:
ENSMGCG00000010051
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All DBs
Position
16:complement(17946000..18085753)
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AA seq
455 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQETFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagcgtggacgttgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccagagaaaggactggtgcccgga
gcgccccatccttacagcacgtccatcagaaaccagcactggaacggctccaatcactcg
atagagactcagagtaccagctctgaggagatagtgccaagcccgccctcgcctcccccg
ccgccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgagggctgcaagggcttctttcggagaagcatccagaagaacatg
gtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaaccgctgc
cagtactgtcggttgcagaagtgcctggaagtcgggatgtctaaggagtcagtgaggaac
gaccggaacaagaagaaaaaggatgagaagaagcaggagtgtacagagagctacgtgttg
agtcctgacaccgagcagatgatcgacagggttcgcaaggcgcatcaggagactttcccc
tctctctgccagctgggcaaatacactacaactaacagctcagaacgacgcgtatctctg
gacgtggacctgtgggacaagttcagtgaactctccaccaagtgcatcataaagacggtg
gagttcgctaagcagctgcccggcttcacaacgctcaccattgccgaccagatcactctc
ctcaaggccgcctgtctggacatcctgatactgcggatctgcacgcgctacaccccggag
caagacaccatgactttctcagatggactcacgctaaatcggacccagatgcacaacgcc
ggcttcggtcccctcactgacctggtgtttgcctttgccaaccagctccttcccctggag
atggacgatgctgagacggggctgcttagcgccatctgtttgctgtgtggagatcgccag
gacttggaagaggcagataaggtggatgtcctgcaggagcctcttctagaggcgttgaag
atttatgtaaggaagaggaggccccacaaaccacatatgttccctaagatgctgatgaag
atcactgatctgagaagcatcagcgctaaaggagcggagcgtgtcatcacgctgaagatg
gagatccccggctccatgccgccgctcatccaggagatgctggagaactcagaaggcctg
gaaagcggggcggcgggcagccggcccagcggtgctcccccaggcagctgcagccccagt
ctgtccccaagctctgcccaaagcagtccagccacacaatcgccgtag
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