Mycolicibacter sinensis: JDM601_1548
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Entry
JDM601_1548 CDS
T01512
Symbol
gadB
Name
(GenBank) glutamate decarboxylase GadB
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
mjd
Mycolicibacter sinensis
Pathway
mjd00600
Sphingolipid metabolism
mjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mjd00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
JDM601_1548 (gadB)
Enzymes [BR:
mjd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
JDM601_1548 (gadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEF35548
UniProt:
F5YZ56
LinkDB
All DBs
Position
complement(1688055..1689467)
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AA seq
470 aa
AA seq
DB search
MSDFPYADRFTVNRVLPERGRSREEVLAELREMAQAEDPTWETGKVSGTMYCGDHEHYRF
LDEAFGLFAHVNVLQRDICPSATKFEGEIIAMALDLMHADAVSDGEPAGMVTTGGTGSII
HALLAYREHAAKHPKKRSVARPNFIKPETGHPAFDKGCHLFGIELRRAPIDPQTTQVDVD
WVANNIDENTIAIMGSACNYGYGTVDPIPELGELAVDRGVGLHVDACLGGFVLPFAQELG
YGDAVPLFDFRVPGVTSISADNHKYGYSLKGASTLLFRDKAYRNAQYFYLPDWSGGKYHS
PGIEGSRSGGLIAAAWASMVQLGREGYRDYAKAILQTAFVMQDAVRSHPELMIMGSPTFC
FAFRSNEFDIYHVADAMKAGGWRFNGQQYPNAIHMAVTRPQTQPGVTAAFAADLDDAVAY
AKQKTAAGEAPISAAIYGGVPGGMTDEAAQFIEGFMERMLDTQQSLPPVS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcccctacgccgatcgcttcacggtgaaccgcgtgctacccgaacgcggc
cgctcgcgcgaggaggtgctcgccgaactgcgggagatggcgcaggccgaagacccgacc
tgggagaccggcaaggtatccgggaccatgtactgcggcgaccacgagcactaccgcttc
ctcgacgaggcgttcgggctgttcgcccacgtgaacgtgctgcagcgtgacatctgcccg
tcggcgaccaagttcgagggcgagatcatcgcgatggccctggacctgatgcacgccgac
gccgtaagcgatggcgaaccggccggcatggtcaccaccggcggcaccggcagcatcatc
cacgcgctgctggcctaccgtgagcacgccgccaagcaccctaaaaagagaagcgtcgcc
cggcccaacttcatcaagcccgagaccggtcacccggccttcgacaagggctgtcacctg
ttcggcatcgagcttcgccgggcgccgattgatccgcagaccacgcaggtcgacgtggac
tgggtggcgaacaacatcgacgagaacaccatcgcgatcatggggtcggcctgtaactac
ggctacggcaccgtcgacccgatcccggagctgggagagctggccgtcgaccgcggggtg
ggcctgcacgtcgacgcctgcctcggcggattcgtgctgccgttcgcccaggagctgggc
tacggggacgctgtaccccttttcgacttccgggtgcccggcgtcaccagtatctcggcg
gacaaccacaagtacggctactccttgaagggcgcgtcgaccctgcttttccgcgacaag
gcctaccgcaacgcgcagtacttctacctgccggactggagcggcgggaaataccattca
ccgggcatcgagggctcccgctccggcgggttgatcgccgccgcgtgggcctcgatggtg
cagctgggccgcgagggataccgcgactacgccaaggcgatcctgcagaccgcgtttgtg
atgcaggacgcggtgcgcagccacccggagctgatgatcatgggttcgccgacgttctgc
ttcgcgttccgctccaacgagttcgacatctaccacgtcgccgacgccatgaaggcaggc
ggctggcggttcaacggccagcagtaccccaacgcgatccacatggcggtcacccggccg
cagacgcagcccggggtgaccgcggcgttcgccgccgacctcgacgacgcggtggcgtac
gccaagcagaagaccgccgccggcgaggcgccgatcagcgccgcgatctacggcggggtc
cccggtggaatgaccgacgaggcagcccaattcatcgaggggttcatggagcggatgctc
gacacgcagcagtctctgccccctgtttcatga
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