Mustela lutreola (European mink): 131827140
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Entry
131827140 CDS
T09578
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
131827140 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlk04040
]
131827140 (SCN1A)
Ion channels [BR:
mlk04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131827140 (SCN1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
131827140
NCBI-ProteinID:
XP_059023107
LinkDB
All DBs
Position
3:148688262..148837494
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AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHSIERNVTMNY
NGTLVNETRFEFDWKSYIQDTRYHYFLEGVLDALLCGNSSDAGQCPEGYVCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAVTASEHSREPSATGGLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTEHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKISTSCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGVAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTT
TGDMFDINEVNNHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSDYVTNILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLVKEDMIIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgctgctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aagaaagatgatgatgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccttttatttatggagacatccctccagagatggtgtcagagccgctggaggacctg
gacccgtactatatcaataaaaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctcatcatgtgcactattttgaca
aactgtgtgtttatgacaatgagtaaccctcctgactggacaaagaatgtagagtacacc
ttcacaggaatatacacttttgaatcacttataaaaattattgcaaggggcttctgttta
gaagactttacttttcttcgggacccatggaactggcttgatttcactgtcattacattt
gcatacgtgacagagtttgtggacttgggcaatgtctcagcgctaagaacattcagagtt
ctccgagcactgaaaacaatttcagtcattccaggcctgaagaccattgtgggggctctg
atccagtcggtgaagaagctctccgatgtcatgatcctgactgtgttctgtctgagcgtg
tttgccctgattgggctgcagctgttcatgggtaacctgcggaataaatgtgtgcaatgg
cctcccaccaatgcttccctggaggaacacagtatagagaggaatgtaactatgaattac
aatggcacacttgtcaatgaaactcgctttgagtttgactggaaatcatatattcaagat
acaagatatcattattttctggagggtgttttggatgcactactatgtggaaatagctct
gatgcaggtcaatgtccagaaggatatgtgtgtgtgaaagctggtagaaatcctaattat
ggctatacaagcttcgacactttcagttgggcttttttgtctctgtttcgactgatgact
caggacttctgggaaaatctgtaccaactgacattacgtgctgctggaaaaacatacatg
attttttttgtgctggtcattttcttgggctcattctatctgataaatttgatcctggct
gtggtggccatggcctatgaggaacagaatcaggccaccttggaagaggcagaacagaaa
gaggctgaatttcagcagatgctcgaacagcttaaaaagcaacaagaggcagctcagcag
gcagcagctgtcactgcctcagagcattccagagaacctagtgccactggggggctctct
gacagctcatctgaagcctccaagttgagctccaagagtgctaaggaaagaagaaatcgg
agaaagaaaaggaaacagaaagagcagtctggtggggaagagaaggatgaggatgagttc
cataagtctgaatctgaagacagcatcaggagaaaagggtttcgcttctccatagaaggg
aaccgattgacgtatgaaaagaggtactcctccccacaccagtctttgttgagcatccgt
ggctccctattttctccaaggcgaaatagcagaacaagccttttcagctttagagggcga
gcaaaagatgtgggatcggagaatgactttgctgatgatgagcacagcacctttgaggat
aacgagagccggagagactccttgtttgtgccccgacgacatggagaacggcgcaacagt
aacctgagtcagaccagtaggtcttcccggatgctggcagtgtttccagcaaatgggaag
atgcacagcactgtggattgcaatggtgtggtgtccttggttggtggaccttcagttcct
acatcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccaccgagactgagatgaggaagagaaggtcaagttctttccatgtttcc
atggattttctggaagatccttcccaaaggcaacgagcaatgagtatagccagcatttta
acaaatacagtagaagaacttgaagaatccagacagaaatgcccaccctgttggtataaa
ttttccaacatattcttaatctgggactgttcaccatattggttaaaagtgaaacatatt
gtcaacctggttgtgatggacccgtttgttgacctggccatcaccatctgcattgtctta
aatactcttttcatggccatggagcactatccaatgacagaacatttcaataatgtgctt
acagtaggaaacttggttttcactgggatctttacagcagaaatgtttctgaaaattatt
gccatggatccttactattatttccaagaaggctggaatatctttgatgggtttattgtg
acacttagcctggtagaacttggccttgccaatgtggaaggattatccgttctccgttca
ttccgactgctccgagttttcaagttggcaaaatcttggccaacattaaatatgctaata
aagatcatcggcaattcagtgggggctctgggtaacctcaccttggtgttggccatcatc
gtcttcatttttgccgtggtcggcatgcagctgtttggtaaaagctacaaagattgtgtc
tgtaagatctccaccagctgtgagctcccacgctggcacatgaatgacttcttccactcc
ttcctgattgtgttccgtgtgctgtgtggagagtggatagaaaccatgtgggactgtatg
gaagtcgctggtcaagccatgtgccttactgtcttcatgatggtcatggtgattggaaac
ttggtggtcctgaacctctttctggccttgcttctgagctcatttagtgcagacaatctt
gcagccacggatgatgataatgaaatgaacaatctccaaatagccgtggacaggatgcac
aagggagtagcttatgtgaagagaaaaatatacgaatttattcaacaatcctttgttaga
aaacagaagattttagatgaaattaaaccacttgatgatctaaacaataaaaaagacagt
tgtatgtccaatcatacaacagaaattggaaaagatcttgactatcttaaagatgtgaat
ggaaccacaagtggaataggaaccggcagcagtgttgaaaaatacattattgatgaaagt
gattacatgtcattcataaacaatcccagtcttactgtgactgtaccaattgctgtagga
gaatctgactttgaaaatttaaacacagaggacttcagtagtgaatcagatctggaagaa
agcaaagagaaacttaatgaaagcagtagctcctcggaaggcagcactgtagacattggt
gcacctgcagaagaacagcctgtagtggaacctgaggaaacccttgaacctgaagcctgt
ttcactgaaggctgtgtacaaagatttaaatgttgtcaaatcagtgtggaagaagggagg
gggaaacaatggtggaacctgagaagaacgtgtttccgaatagttgaacacaactggttt
gagaccttcattgtcttcatgattctgcttagtagtggtgcactggcatttgaagatata
tatattgatcagcgaaagacaattaagacaatgttggaatatgctgacaaggttttcact
tacattttcattctggaaatgcttctaaaatgggtagcatatggctatcaaacatatttt
accaatgcctggtgttggctggacttcttaattgtggatgtttcattggtcagtttaaca
gcaaatgccttgggttactcagaacttggtgccatcaaatctctcaggacactgagagct
ctgagacctctaagagccttatcacgatttgaagggatgagggtggttgtgaatgccctt
ttaggagcaattccatccatcatgaatgtgcttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccaca
actggtgacatgtttgacatcaacgaagtgaataatcattctgattgcctaaaactaata
gaaagaaatgagactgcccgatggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgcttcaagttgccacatttaagggatggatggatataatgtatgca
gcagttgattccagaaatgtggaactccagcctaagtatgaggaaagtctatacatgtat
ctttactttgttattttcatcatctttgggtccttcttcaccttgaacctgtttattggt
gtcattatagataatttcaaccagcaaaaaaagaagtttggaggtcaagacatctttatg
acagaagaacagaagaaatactataatgcaatgaaaaaattaggatcgaaaaagccacaa
aagcctatacctcgaccaggaaacaaatttcaaggaatggtctttgactttgtaaccaga
caagtttttgacattagcatcatgattcttatctgtctcaacatggtcaccatgatggta
gaaacagatgaccagagtgattatgtgactaacattttgtcacgcatcaacctggtgttc
attgtgctgttcactggagagtgtgtgctgaagctcatctccctccgccattattatttt
accataggctggaatatttttgattttgtggttgttattctctccattgtaggcatgttt
ctggctgaactgatagaaaaatactttgtgtcccctaccctgttccgagtgatccggctg
gccaggattggacgaatcttgcgtctgatcaaaggggccaaggggatccgcacgttgctc
tttgctctgatgatgtcccttcctgccttgtttaacatcggcctcctgctcttcctggtc
atgttcatctacgccatctttggaatgtccaactttgcctatgttaagagggaagttgga
attgatgacatgttcaactttgagacctttggcaacagcatgatctgcctgttccaaatt
accacctccgctggctgggacggattgctggcacctattctcaacagtaaaccaccagat
tgcgatcctaataaagtaaaccctggaagctcagttaagggagactgtgggaacccctca
gtagggattttcttttttgtgagttacatcatcatatcatttctggttgtggtgaacatg
tacattgctgtcatcctggagaacttcagtgttgctacagaagaaagtgcagagcccctg
agtgaggatgacttcgagatgttctatgaggtttgggagaagtttgatcctgatgccacc
cagttcatggaatttgaaaaactatctcagtttgcagccgctctcgaacctccccttaat
ctgccacaaccgaacaaacttcagctcattgccatggatttgcccatggtcagtggtgac
cgaatccattgtcttgacatcttatttgcttttacaaagcgggttctgggagagagtgga
gagatggatgctctccgaatacagatggaagagcgctttatggcttccaacccatcaaag
gtctcttatcagccaataactacgactttaaaacgaaaacaagaggaggtgtctgccgtt
attattcagcgtgcttacaggcgccacctcttaaagcgaactgtaaaacaagcttcattt
acatataataaaaataaaatcaaaggtggggctaatcttcttgtgaaagaagacatgatc
attgacagaataaatgaaaactcaattacggagaaaactgacctgaccatgtccacagca
gcttgtccaccttcttatgatcgggtaacaaagccaatcgtggaaaaacacgagcaagaa
ggcaaagatgaaaaagccaaagggaaataa
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