Mycobacterium marseillense: CKJ54_17310
Help
Entry
CKJ54_17310 CDS
T05049
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mmal
Mycobacterium marseillense
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmal03032
]
CKJ54_17310
03036 Chromosome and associated proteins [BR:
mmal03036
]
CKJ54_17310
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_17310
DNA replication proteins [BR:
mmal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CKJ54_17310
Chromosome and associated proteins [BR:
mmal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CKJ54_17310
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CKJ54_17310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ASW91433
LinkDB
All DBs
Position
complement(3739153..3739803)
Genome browser
AA seq
216 aa
AA seq
DB search
MNKAELIDVLTQKLDTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSDGPAVKRGVVGGTGAAKKTAAKK
APAKKAAAKKAPAKKAAAKKAPAKKAAVKKAPAKKAAVKKAPARKAATKAPAKKAAAKKA
PARKAAAKKAPAKKAASKSTARKAPAKKTTARRGRR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcagagctcattgatgtgctcacacagaaattggacacggaccgtcggcag
gcgaccgcagcggtcgagaacgttgtcgacaccattgtgcgtgcggtacacaagggcgac
agcgtcacgattaccgggttcggtgttttcgaacagcggcgccgcgcagcgcgcgtggcc
cgcaacccgcggaccggtgagacggtgaaggtgaagccgacttccgtccccgcgttccgt
cccggtgcccaattcaaagcggttgtgtctggcgcacagcgtctcccgtcggacggcccg
gccgtcaagcgcggtgtggtaggtggcacgggcgcggccaagaagaccgcggccaagaag
gctcccgccaagaaagctgcggccaagaaggcacccgccaagaaggctgcggccaagaag
gctcccgccaaaaaggccgcagtgaagaaggccccggccaagaaggcggcagtgaagaag
gctccggcccgcaaggccgcgaccaaggcgccggccaagaaggctgcggccaagaaggcg
ccggcccgcaaggctgcggccaagaaggctccggccaagaaggccgcgagcaagtccacg
gcccgcaaggctcctgccaagaagacgaccgcgcgtcgcggccgccggtag
DBGET
integrated database retrieval system
