Corallococcus macrosporus DSM 14697: MYMAC_005436
Help
Entry
MYMAC_005436 CDS
T05096
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmas
Corallococcus macrosporus DSM 14697
Pathway
mmas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYMAC_005436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmas03019
]
MYMAC_005436
03009 Ribosome biogenesis [BR:
mmas03009
]
MYMAC_005436
Enzymes [BR:
mmas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MYMAC_005436
Messenger RNA biogenesis [BR:
mmas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYMAC_005436
Ribosome biogenesis [BR:
mmas03009
]
Prokaryotic type
rRNA processing factors
MYMAC_005436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ATB49782
UniProt:
A0A250K246
LinkDB
All DBs
Position
6827611..6830451
Genome browser
AA seq
946 aa
AA seq
DB search
MSSILVINAAGRETRVALVEGGHIAEFYLERKKDKGVVGNIYKGRVVRVLPGMQAAFVDI
GLEKAAFLYVSDVVYDPDFARAQFELTEGEHEDAPDVPDESEAEAAEFAARSAPPRHPEP
EDAHFEPVAAPTASLPRDTALELAANAPPVTPPGAETPVAPAEEAPAAAPETAVAAPETA
AAAEAAAQPVTPEQIVAVAPSTTASVEAAPAPVAGEAVAAPSEPQVTEPAAVAPAAQPES
PEAALAVAAASEPAAVAAEAPPEAAPGDVAELPVEPPPPSAAALGDIIPPPAPESAQAAK
PSEVSGERRTPREAREAREPRGRDKEREKDKGRRPQQEEKRRGDKRDEEKAKPRRTDKIE
DLLKVGQEVVVQISKDPIGTKGARLTSHISIPGRHLVFMPTVDHVGISRRISNEKERRRL
REIVDRLRPPGTGFIVRTVAENVPQEKLESDIRFLIEVWNQVVRKNEKRGGPGLLHPDLD
LILRATRDLFAHDVEKLVVDDREEYERILGFVTAQDPALRDRVALHEGDDTVFDAYGIEQ
ELQRATQRKVWLKSGGYLIIDQAEALTAIDVNSGRYVGKKSLEETITKINVEAAKEIVYQ
LRLRNIGGIIICDFIDMEKAQNRDKVFKALQEALGRDKAKTNVLRISELGLVEMTRKRVR
ESIGRMLHEDCPYCDGNGFVKTATTVAYEIFREIRREAPGYKDSTLVINCNAEVARLLQG
EERNELRHLMDRYNKSIQVKAQQNYHREQYDIYGRSATGPEHKVASSPGSGDGELAMQQR
KPDSNGGGYGRQEQGRRGGGGGGGGRDRGGERGERSERGERGGGRREGRGGDRPRGERGG
ERGERGERSERGGERGERGERSERGGERSERGERGERSERGERSERGERGERSERGERHE
RGDRRGERGERGGSQGPSGGGESAGGSTPPPPPSSGGGSEPSGGTT
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatcctggtcatcaacgccgcgggtcgcgagacgcgcgtcgcgctcgtcgag
ggcggacacatcgcggagttctacctcgagcgtaagaaggacaagggcgtcgtcgggaac
atctacaagggccgggtcgtccgggtgctccccggcatgcaggccgccttcgtggacatt
ggcctggagaaggccgcgttcctctatgtcagtgacgttgtctacgaccctgacttcgcg
cgcgcgcagttcgagctgaccgaaggcgagcacgaggatgcgccggacgtcccggacgag
tccgaggccgaggccgccgagttcgccgcccgcagcgcgcccccccgtcacccggagccc
gaggacgcccacttcgagcccgtcgcggcgcccaccgcgtccctgccccgcgacaccgcc
ctggagctggccgccaacgcgccgccggtgacgccgccgggcgcggagacgccggtggcg
cccgcggaggaagcgccggccgccgcgccggaaacggcggtcgccgcgccggagacggcg
gccgcagccgaggccgccgcgcagcccgtcacgcccgagcagattgtggcggtcgcgccg
tccaccacggcttccgtcgaggcggcgccggctcccgtcgcaggcgaggccgtggccgcg
ccctccgagccccaggtgacggagccggctgccgtggcgcccgccgctcagccggagtcg
cccgaggcggcgctggccgtcgccgcggcgtccgagcccgcggccgtcgccgcggaggcc
ccgcccgaggcggcccctggcgacgtggcggagctgcccgtcgagccgccgccgccctcg
gccgcggcgctgggcgacatcatccccccgcccgccccggagtccgcgcaggcggcgaag
ccttccgaggtctccggcgagcgccgcacgccgcgcgaggcccgcgaggcgcgtgagccc
cgcggccgggacaaggagcgcgagaaggacaagggccgccggccgcagcaggaggagaag
cgccggggcgacaagcgcgacgaggagaaggccaagccgcgccgcaccgacaagattgaa
gacctgctgaaggtgggccaggaagtcgtcgtccagatttcaaaggaccccatcggcacc
aagggcgcgcggctcacctcgcacatctccatccccgggcgtcacctggtgttcatgccc
accgtggaccacgtgggcatcagccgccgcatctccaacgagaaggagcgccggcgcctg
cgtgaaatcgtggaccgcctgcgcccgcccgggacgggcttcatcgtccgcaccgtcgcg
gagaacgtgccgcaggagaagctcgagagcgacatccggttcctcatcgaggtgtggaac
caggtggtgcgcaagaacgagaagcgcggcggccccggcctgctgcacccggacctggac
ctcatccttcgcgccacgcgcgacctcttcgcgcacgacgtggagaagctcgtcgtcgac
gaccgcgaggagtacgagcgcatcctcggcttcgtcaccgcgcaggacccggcgctgcgg
gacagggtggcgctgcacgagggcgacgacaccgtcttcgacgcgtacggcatcgagcag
gagctgcagcgcgccacccagcgcaaggtgtggctgaagagcggcggctacctcatcatc
gaccaggccgaggcgctcaccgccatcgacgtcaactcgggccgctacgtcggcaagaag
agcctcgaggagaccatcaccaagatcaacgtcgaggcggccaaggagattgtctaccag
ctccggctgcgcaacatcggcggcatcatcatctgcgacttcatcgacatggagaaggcg
cagaaccgcgacaaggtcttcaaggcgctgcaggaggcgctgggccgcgacaaggccaag
acgaacgtgctgcgcatctccgagctgggcctggtggagatgacgcgcaagcgcgtgcgc
gagtccattggccgcatgctccacgaggactgcccgtactgcgacggcaacggcttcgtg
aagacggccaccaccgtggcctacgaaatcttccgggagattcgccgcgaggcgccgggc
tacaaggactccacgctggtcatcaactgcaacgcggaggtggcgcgcctgctccagggc
gaggagcgcaacgagctgcgtcacctgatggaccggtacaacaagtccatccaggtcaag
gcgcagcagaactaccaccgcgagcagtacgacatctacggacgctcggccacgggcccg
gagcacaaggtggcctcgtcgcccggctcgggtgacggtgagctggccatgcagcagcgc
aagccggacagcaatggcggaggctacggccgccaggagcagggccggcgcggcggcggt
ggcggcggcggcggcagggaccggggcggtgagcgaggtgaacgctccgagcggggtgag
cgcggcggaggccgccgcgagggccgaggaggcgaccgcccccggggtgagcgtggcggt
gagcgcggcgaacggggtgaacgctccgagcgtggcggtgagcgcggcgaacggggtgaa
cgctctgagcgtggcggtgagcgctccgagcgcggcgaacggggtgaacgctccgagcgc
ggtgagcgctccgagcgcggcgaacggggtgaacgctccgagcgcggcgaacggcacgag
cgcggtgaccgtcggggcgagcgcggtgagcgcggcggctcgcagggcccgtccggcgga
ggtgagagcgccggtggctcgacgccgcccccgcctccatcctcggggggcgggtcggag
ccttccggcggcacgacctga
DBGET
integrated database retrieval system
