Methanococcus maripaludis X1: GYY_07790
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Entry
GYY_07790 CDS
T01584
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mmd
Methanococcus maripaludis X1
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmd03016
]
GYY_07790
Enzymes [BR:
mmd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
GYY_07790
Transfer RNA biogenesis [BR:
mmd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
GYY_07790
Prokaryotic type
tRNA splicing ligases
GYY_07790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AEK20412
UniProt:
G0H2D7
LinkDB
All DBs
Position
complement(1455294..1456736)
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AA seq
480 aa
AA seq
DB search
MKSTVTKIAEKTYQLPVSYKDCMRVPGNVYLDELLFENLQEDVFEQIANVACLPGIQKYS
LAMPDCHYGYGFCIGGVAAFDEVTGVISPGGVGFDINCGVRLVKTNLTKNDVTPKLKELL
SEIFKNVPSGLGSKGKIRITKDEIDSVLEEGVSWAVEEEYGWERDIKHIEEHGKMKEADP
TLVSDNAKKRGLPQLGSLGSGNHFLEVQYVDEIFDEEAAKTFGVSPDQVVLMIHTGSRGL
GHQICADYLRYMENAAKKYNIKLPDRQLACAPINSEEGQKYFKAMSCGANYAWANRQLIT
HWIRESFETVFKTSAEDLEMDIIYDVAHNIAKKEQHLVDGVLKNVVVHRKGATRAFGPGH
AEIPSDYVNIGQPVIIPGDMGTASYLMHGTEKAMEQTFGSTAHGAGRALSRVKALKLYTG
NEVQEALQKKGILVMADSKGVIAEECPEAYKDIENVADICHDSGISLKVAKMKPMGVVKG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacggttactaaaatcgctgaaaaaacgtaccagcttccagtaagttataaa
gactgcatgagggttcctggaaacgtttatttggatgaattattgtttgaaaatcttcaa
gaggatgtatttgaacagattgcaaatgttgcatgtcttccaggtattcaaaagtactct
cttgcaatgcctgactgccactatggatacggtttttgtatcgggggagttgcagcattt
gacgaagttacaggagtaatcagtccaggcggagttggttttgatatcaactgtggtgtg
agactagtcaaaacaaatttaacgaaaaacgatgttactccaaaattaaaggaactttta
tccgaaatttttaaaaatgttccttcaggacttggaagcaaaggaaaaataagaattaca
aaagatgaaattgatagtgttcttgaagaaggggtttcatgggctgttgaggaagaatat
ggctgggaaagagatataaaacatattgaagaacacggaaaaatgaaagaagcagatcca
acgcttgtttcagacaatgctaaaaaaagaggacttccacaattaggatctttaggtagt
ggtaaccactttttagaagttcagtatgttgatgaaatatttgatgaagaagctgcaaaa
acgtttggagtatcccctgatcaggtagttttgatgatacacacgggttcaagaggtctt
ggacaccagatatgtgcagattacttaagatacatggaaaatgctgcaaaaaaatacaat
attaaattacctgacagacagcttgcatgtgcaccgataaattcggaagaaggtcaaaag
tactttaaagcaatgtcctgtggtgcaaattacgcatgggcaaacaggcagttaataacg
cactggataagggaaagttttgaaacagtatttaaaacgagtgcggaagatttagaaatg
gatataatatatgacgtagcacataacattgctaaaaaagagcagcatttggttgatgga
gtattgaaaaatgtcgtagttcacaggaaaggtgctacaagggcatttggaccaggtcat
gctgagattccatctgattacgttaatattggacagccagtaataattccaggtgatatg
ggcactgcgtcttatttaatgcacggaaccgaaaaagcaatggaacaaacgtttggatca
actgcacacggtgctggaagggccttaagtcgagtaaaagcacttaaactctacactgga
aatgaagttcaggaagcactccagaaaaaaggaattttggtaatggcagattcaaaaggc
gtcattgcagaagaatgtcctgaagcttacaaggatattgaaaatgttgcagatatatgc
cacgattcaggaatatctttgaaagttgcaaaaatgaaaccgatgggagttgtaaaagga
taa
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