Mustela nigripes (black-footed ferret): 132004211
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Entry
132004211 CDS
T09425
Symbol
RARA
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04659
Th17 cell differentiation
mnp04915
Estrogen signaling pathway
mnp05200
Pathways in cancer
mnp05202
Transcriptional misregulation in cancer
mnp05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
132004211 (RARA)
09152 Endocrine system
04915 Estrogen signaling pathway
132004211 (RARA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132004211 (RARA)
05202 Transcriptional misregulation in cancer
132004211 (RARA)
09162 Cancer: specific types
05221 Acute myeloid leukemia
132004211 (RARA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132004211 (RARA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mnp03310
]
132004211 (RARA)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132004211 (RARA)
Nuclear receptors [BR:
mnp03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
132004211 (RARA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132004211
NCBI-ProteinID:
XP_059236390
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Position
16:complement(21278509..21322408)
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AA seq
472 aa
AA seq
DB search
MTSPPGPLVFAGKMYESVEVGGLTPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLR
TPLWNGSNHSIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKG
FFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEAP
KPECSESYTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSE
LSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGL
TLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDM
LQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLI
QEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccgcccggacctcttgtcttcgcggggaagatgtacgagagtgtggaagtg
ggggggctcacccccacccccaatcccttccttgtggtggatttttataaccagaaccgg
gcctgtttgctcccggagaaggggctccccgcccctggtccctactccaccccgctccgg
actccgctttggaatggctcaaaccactccatcgagacccagagcagcagttcggaagag
atagtgcccagccctccctcgccgccccctctcccccgcatctacaagccttgctttgtc
tgccaggacaaatcctcaggctaccactatggggtcagcgcctgtgagggctgcaagggc
ttcttccgccgcagcatccagaagaacatggtgtacacgtgtcaccgggacaagaactgc
atcatcaacaaggtgacccggaaccgctgccagtattgccgactgcagaagtgctttgaa
gtgggcatgtccaaggagtctgtgaggaacgacagaaacaagaagaagaaggaggcgccc
aagcccgagtgctccgagagctacacgctcacgcctgaggtcggggagctcatcgagaag
gtgcgcaaagcgcaccaggaaaccttccctgccctctgccagctgggcaaatacactacg
aacaacagctcagagcaacgtgtctctctggacattgacctctgggacaagttcagtgaa
ctctccaccaagtgcatcattaagactgtggagttcgccaagcaactgcccggcttcacc
accctcaccattgctgaccagatcaccctcctcaaggctgcctgcctggacatcctgatc
ctgcggatctgcacgcggtacacgcccgagcaggacaccatgaccttttccgatgggctg
accttgaaccggacccagatgcacaatgccggcttcggccccctcacggacctggtcttc
gccttcgccaaccagctgctgcccctggagatggatgatgctgagactgggcttctcagt
gccatctgtctcatctgtggagaccggcaggacctggagcagccagacagggtggacatg
cttcaggagccgctgctggaggcgctgaaggtctatgtgcggaaacggaggcccagccgc
ccccacatgttccccaagatgctgatgaagatcacagacctgcgaagcatcagtgctaag
ggggctgagcgggtgatcaccctgaagatggagatcccgggctccatgccacctctcatc
caggaaatgctggagaactcggagggcctggacactctgagcggacagccagggggtggg
gggcgggatgggggtggcctggcccccccacccggcagctgtagccccagcctcagtccc
agctcgaacagaagcagcccggccacccactccccgtga
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