KEGG   Mycobacterium saskatchewanense: MSAS_53340
Entry
MSAS_53340        CDS       T07413                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
msak  Mycobacterium saskatchewanense
Brite
KEGG Orthology (KO) [BR:msak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msak03032]
    MSAS_53340
   03036 Chromosome and associated proteins [BR:msak03036]
    MSAS_53340
   03400 DNA repair and recombination proteins [BR:msak03400]
    MSAS_53340
DNA replication proteins [BR:msak03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MSAS_53340
Chromosome and associated proteins [BR:msak03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MSAS_53340
DNA repair and recombination proteins [BR:msak03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MSAS_53340
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: BBX66160
UniProt: A0A1X2C6K5
LinkDB
Position
5632586..5633221
AA seq 211 aa
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVAGAQRLPAEGPAVKRGVGAGAAKKVAKKAPA
KKAASKAPAKKAATKAPAKKVATKAPAKKVAPAKKAVTKAPAKKAVTKAPAKKAAPAKKA
ATKAPAKKAATKAPAKKAPAKKTTTARRGRR
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtcggcag
gcgaccgctgccgtcgaaaatgtcgtcgacaccattgtgcgcgcggtgcacaagggtgac
agcgtcaccattaccgggttcggtgtgttcgagcagcggcggcgcgcggcgcgcgtggcc
cgcaacccgcgcaccggtgagacggtgaaggtgaagccgacatccgtcccggcgtttcgt
ccgggtgcccaattcaaggcggttgtggctggcgcacagcgcctcccggcggaaggacct
gcagtgaaacgtggtgttggagcaggtgcggcgaagaaggtggccaagaaggcccccgcc
aagaaggccgcgagcaaggcgccggccaagaaggccgcgaccaaggctccggccaagaag
gtcgcgacgaaggctccggccaagaaggtcgcgcccgccaagaaggccgtgaccaaggct
ccggccaagaaggccgtcaccaaggctccggccaagaaggccgcgcccgccaagaaggcc
gcgaccaaggctccggccaagaaggccgcgaccaaggctccggccaagaaggctccggcc
aagaaaacgacgaccgcccgtcgcggccgccgctag

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