Myxococcus hansupus: A176_001275
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Entry
A176_001275 CDS
T04077
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mym
Myxococcus hansupus
Pathway
mym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A176_001275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mym03019
]
A176_001275
03009 Ribosome biogenesis [BR:
mym03009
]
A176_001275
Enzymes [BR:
mym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A176_001275
Messenger RNA biogenesis [BR:
mym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A176_001275
Ribosome biogenesis [BR:
mym03009
]
Prokaryotic type
rRNA processing factors
A176_001275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AKQ64363
UniProt:
A0A0H4WS06
LinkDB
All DBs
Position
complement(1486572..1489562)
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AA seq
996 aa
AA seq
DB search
MSSILVINAAGRETRVALVESGHIAEFYLERKKDKGVVGNIYKGRVVRVLPGMQAAFVDI
GLEKAAFLYVSDVVYDPDFARAQFELTEGEHEDAPDVPDESEAEAAEIAARHAPRHTEVE
AEEAQVEAAAARTESLPRDTVMELAANAPSVTPPAESDAAVATSETPSASAQAGAAPSEA
QTAEGTSSAVTVASEATTAEAATATGAAPSEGSTSAGAVTAAITAVAAEGATSADAVTTE
SPAATGTVTAEAATVGGAVTAEPSSAVGEAPSAQPTASPEAALSLAAASEPAAVAADVGQ
VSGTDVAGLPVEPPPPAASALGDIIPSPAGAESAQAARPAEVSGERRTPREAREAREPRS
KEKEKGRRPQEEKRRGDKRDEEKEKAKPRRTDKIEDLLKVGQEVVVQISKDPIGTKGARL
TSHISIPGRHLVFMPTVDHVGISRRISNEKERRRLREIVDRLRPPGTGFIVRTVAENVPQ
EKLESDIRFLIEVWNQVVRKNEKRGGPGILHPDLDLILRATRDLFAHDVEKLVVDDREEY
ERILGFVTAQDPALRDRVALHEGDDTVFDAYGIEQELQRATQRKVWLKSGGYLIIDQAEA
LTAIDVNSGRYVGKKSLEETITKINVEAAKEIVYQLRLRNIGGIIICDFIDMEKAQNRDK
VFKALQEALGRDKAKTNVLRISELGLVEMTRKRVRESIGRVLHEDCPYCDGNGFVKTATT
VAYEIFREIRREAPGYKDSTLVINCNAEVARLLQGEERNELRHLMDRYNKSIQVKAQQNY
HREQYDIYGRSATGPEHKVASSPGSGDGELAMQQRKPDSNGGGGYGRQEQGRRGGERGGR
DRDRGGDRERGGGDRERGGGDRERGGGDRERGGERSGGERPERGGDRREGRREGRGGDRP
RGERSERGGERSERGGGERGERSERGGGERSERGERGDRSERGERHERGERRGERGERGG
GAQNTSGSGGGDSASGSTPPPPASSGGSEGSGGGTD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatcctggtcatcaacgccgcgggtcgcgagacgcgcgtcgcgctcgtcgag
agcggacacatcgcggagttctacctcgagcgtaagaaggacaagggcgtcgtcgggaac
atctacaagggccgggtcgtccgggtgctccccggcatgcaggccgcctttgtggacatc
ggcttggagaaggccgccttcctctacgtcagtgacgtcgtctacgacccggacttcgcg
cgcgcgcagttcgagctgaccgagggcgagcacgaggacgcgccggatgtccccgacgag
tccgaggccgaggccgctgaaatcgccgcccgccacgccccccgccacaccgaggtggag
gccgaggaggcccaggtcgaggccgccgcggcccgcacggagtcgctgccgcgcgacacc
gtcatggagctggccgccaatgcgccttccgtgacgccccccgccgagtccgatgcggcc
gtggcgacgtccgagacgcccagcgcttccgctcaggctggcgcggcgccctccgaggcg
cagacggccgagggcacctcgtccgcggtgacggtggcctccgaggccaccacggccgag
gccgccacggcgacgggcgcggcgccttccgagggcagcacgtccgcgggtgcggtgacg
gccgccatcaccgcggtggcggccgagggcgccacgtcggcggatgcggtgaccacggag
tcccccgccgcgaccggtacggtgacggccgaggccgccacggtgggcggtgcggtgacg
gccgagccctcctcggcggtgggtgaagcgccttccgcgcagccgacggcgtcgcccgag
gcggcgctgtctctcgcggctgcgtccgagcccgctgccgtcgccgctgacgtcggccag
gtgtccggtaccgatgtggccgggctgcccgtcgagccgccgcctcccgccgcctccgcg
ctcggggacatcatcccctctcccgcgggcgccgagtccgcgcaggctgcccgccccgcc
gaggtctccggtgagcgccgcacgccgcgcgaggcccgtgaggcccgcgagccccgaagc
aaggagaaggagaagggtcgtcggccgcaggaggagaagcgccgcggcgacaagcgcgac
gaggagaaggagaaggccaagcctcgccgcacggacaagattgaagacctgctgaaggtg
ggccaggaagtcgtcgtccagatttccaaggaccccatcggcaccaagggcgctcggctc
acctcgcacatctccatcccgggccggcacctggtgttcatgcccacggtggaccacgtg
ggcatcagccgccgcatctccaacgagaaggagcgccggcgtctgcgtgaaatcgtggac
cgcctgcgcccgcccgggacgggcttcatcgtccgcaccgtcgcggagaacgtgccccag
gagaagctcgagagcgacatccggttcctcatcgaggtgtggaaccaggtggtgcgcaag
aacgagaagcggggcgggcccggcatcctgcacccggacctggacctcatcctgcgcgcc
acgcgcgacctcttcgcgcacgacgtggagaagctcgtcgtcgatgaccgcgaggagtac
gagcgcatcctcggcttcgtcaccgcgcaggacccggcgctgagagaccgcgtggccctg
cacgagggcgacgacaccgtcttcgacgcgtacggcatcgagcaggagctccagcgcgcc
acccagcgcaaggtgtggctgaagagcggcggctacctcatcatcgaccaggccgaggcg
ctcaccgccatcgacgtcaactcgggccgctacgtcggcaagaagagcctcgaggagacc
atcacgaagatcaacgtcgaggccgccaaggagatcgtctaccagctccgtctgcggaac
atcggcggcatcatcatctgcgacttcatcgacatggagaaggcgcagaaccgcgacaag
gtcttcaaggcgctccaggaagccctgggccgcgacaaggcgaagacgaacgtgctgcgc
atctccgagctgggcctcgtggagatgacgcgcaagcgcgtgcgcgagtccattggccgc
gtgctccacgaggactgcccgtactgcgacggcaacggcttcgtgaagacggccaccacc
gtggcgtacgaaatcttccgcgagattcgccgcgaagcgccgggctacaaggactccacg
ctggtcatcaactgcaacgcggaggtcgcgcgcctgctccagggcgaggagcgcaacgag
ctgcggcacctgatggaccggtacaacaagtccatccaggtcaaggcgcagcagaactac
caccgtgagcagtacgacatctacggacgctcggcgacgggccccgagcacaaggtcgcg
tcgtccccgggctcgggtgatggcgagctggccatgcagcagcgcaagcccgacagcaac
ggcggcggcggttacggccgccaggagcagggccgtcgtggcggcgagcgcggcggcagg
gaccgggaccgcggtggtgaccgggagcgtggcggtggtgaccgggagcgcggtggtggt
gaccgggagcgcggtggtggtgaccgggagcgaggtggtgagcgcagcggtggcgagcgc
ccggagcgcggcggtgaccggcgcgaggggcgccgcgagggccggggtggcgaccgtccc
cgtggcgaacggagtgagcgcggtggtgagcgttccgagcgcggcggtggcgagcgcggt
gaacgctccgagcgcggtggtggcgagcgttccgagcgaggtgagcggggcgaccggtcc
gagcgcggtgaacggcacgagcgcggcgagcgccggggtgagcggggcgagcgcggtggt
ggtgcgcagaacacgtccggctccggcggtggagacagcgccagtggttcgacgcctccg
cccccggcctccagtggcggctccgaaggctctggcggcggcacggactga
DBGET
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