Maylandia zebra (zebra mbuna): 101471517
Help
Entry
101471517 CDS
T02814
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04010
MAPK signaling pathway
mze04260
Cardiac muscle contraction
mze04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101471517
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101471517
04261 Adrenergic signaling in cardiomyocytes
101471517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101471517
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101471517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA_2
VWA
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
101471517
NCBI-ProteinID:
XP_012778720
LinkDB
All DBs
Position
LG7:complement(62197947..62283145)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSGLQGYRMDSINVLGMRTLLRLMGIFCLLITAEAQMKIPPETVQQWALRFSAELRECAA
KYSGSLLLQKKLKDVEPIIKIVEVDGQDLVKDYSDEIERMLGSKMKSVMRLAESAEDSDL
YHEFNATLKFDYYNSMMINTADEDGNYVDLGGEFPLEENEHFNKLPVNTQMSNIQVPTNV
HNKDPNILNAIYNTEALNDIFIGNFQKDPTLTWQYFGSSTGFFRIYPGIKWTPDSNGVVA
FDCRNRNWYIQAATSPKDIIIMVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYT
DYVRYVEPCFRGTLVQADLDNREHFKVLVEELHVKGEAKIKNAMKESFKILNEARANGQG
SMCNQAIMLITDGAMEDFQSVFEEFNWPERRVRVFTYLIGREMTFAQNTKWIACNNKGYY
THIATLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLPNTEELFTTKAQSLLLM
TSVAMPVFSKKKETLSHGILLGVVGSDIPLMEVMKLAPRYMLGAHGYAFLINNNGYILSH
PDLRPLYKDGKKLKPKPNYNSVDLSEVEWEDTDELLRTAMVKGETGTLSLNIRASVDKGK
RPLYLTNEYFYTNIDNTPFSFGMALTKGHGKLMFMGNVSVEEGLHDLTSPDLTIASEWTY
CETDIDPDHRKYSQLQAAIRYLLGKEPDLECDEVLLSQTLFDAVVTAPLEAYWNTLMLND
RVEPGVETAFLGTRSGLMRVVRYAGVETRVAKKFLTPADKDNLFTIDHFPLWYRLAVENT
PGKFYYYPVNDKGVKYIIATTSVTVSTEGKTAMAGAVGLQMSLDWLEKRFWAIAKQPNDT
DCSDIEGVCPLSCDSADLSCYLVDNNGFVVLSKERREIGRFFGEVDGSIMASLLKMGMFK
KVSLFDYQAMCKTGHHHASSARPLLSPFYVIMALMRWFFSNALMFLLDFNLCGLWHSDYF
VDAKAGYHTSHKQKKLDALQPCDTAYPGFMYDPSVREANSLNKCGRCQKMFVVQQIPDSN
LVLVVTQAYCDCSRQYGAILLEPKEIKYNATVKCNRMRSQKVRRRPQSCHAYHPKENAKD
CGGAAAISLSLSLFSASLLISLVAEF
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacttcagggatacaggatggacagcattaatgttttgggaatgaggaccctc
ttgaggctaatgggaattttttgccttttgatcacagctgaggctcagatgaagatccca
cctgagacggtgcagcagtgggcgttgagattctctgcagaacttcgagagtgtgcagcc
aaatactctggatctctgctgctgcagaagaaattgaaggatgtggagccaatcattaag
atcgtagaggtggatggacaagacctggtgaaggactactctgatgaaatcgaacgaatg
ttgggaagtaagatgaagtcggtgatgaggttagcagaatctgcagaagactcagatttg
taccatgaattcaatgcaacattaaagtttgattactacaattcgatgatgatcaacact
gcggatgaggatgggaactatgtggatctgggtggagaatttcccctcgaggagaatgaa
cattttaataaactgcctgtcaacactcagatgagcaacatccaggttcccaccaatgtg
cacaacaaagatcctaacatcctcaatgccatctacaacacagaggctttaaacgacatc
ttcatcggtaacttccagaaggatcctacactcacctggcagtactttggcagctccacg
ggtttcttcaggatctaccctggtattaaatggactccagactccaacggtgttgtagcc
ttcgactgcaggaacagaaactggtacatccaggctgccacgtctcccaaagacatcatc
atcatggtggacattagcggcagtatgaagggactgaagatgaccattgccaaacacacc
atcaacaccattctggatacactgggagagaacgactttgtcaacgtcattgcttacaca
gactacgttcgctacgtggagccgtgtttcagaggaactctggtccaggccgacttggac
aacagagagcactttaaggtgttggtggaggagctgcatgtcaaaggcgaagcaaagatc
aagaatgccatgaaggagtccttcaaaatcctgaacgaggcgagggcgaacggtcagggc
agcatgtgtaaccaggccatcatgctgatcacagacggcgccatggaggactttcagtcc
gtctttgaggagttcaactggcctgagcgcagggtgcgagtcttcacctacctgattggc
agagagatgacctttgctcaaaacaccaagtggatcgcctgcaacaacaaaggttattac
acacacatcgccacactggcagatgtgcaggagaacgtcatggagtacctgcacgtgctc
agtcggccaatggtcatcaaccatgaccacgatatcatctggacagaggcctacatggac
actgtgcttccaaacacagaggagcttttcaccaccaaggctcagagtctgctgctcatg
acctcagtggccatgccggtcttcagcaagaagaaggagacgctgtcccatggcatcctg
ctcggtgtggtcggctccgacatcccgctgatggaggtgatgaagctggcaccccgatac
atgctgggagctcacggctacgccttcctcatcaacaacaacggctacatcctgtctcac
cccgaccttcgacctctgtacaaagacggaaagaaactgaagccgaagccaaactataac
agtgtggatctgtcagaggtggagtgggaggacacagacgagctgctgaggacggccatg
gtgaaaggagagacgggcactctcagcctgaacatcagagcgtcggtggataaagggaaa
aggccgctgtacctcaccaacgaatatttctacaccaacattgacaacacgcctttcagc
ttcggcatggcactgaccaaaggtcacgggaagctcatgtttatgggaaatgtatctgtg
gaagaagggctgcatgatctgacctcaccagatctcaccatcgcctctgagtggacttac
tgtgagacagacatcgaccctgatcaccgaaagtactcacagctgcaggccgccatccgc
tacctgctggggaaggagcctgacctcgagtgtgacgaggtgctgctgtcgcagacgctg
ttcgacgccgtggtcacagctccgcttgaggcctactggaacaccctgatgctgaacgac
agggtggagccaggggttgagacggctttcctcggtactcgatccggcctgatgagggtt
gtgagatatgcaggagtggagaccagagtggcaaagaagttcctgactccagctgataaa
gataatctgttcaccatcgatcacttcccgctgtggtaccgcctggctgtagaaaacact
cctggaaaattctactactacccagtgaatgacaaaggagtgaagtacatcatagcgacg
acatcggtgaccgtgtcaaccgagggaaagacggccatggctggagctgtcgggctgcag
atgtccttggattggctggaaaagcggttctgggccatcgccaagcagcccaacgacaca
gattgttcagacattgaaggtgtgtgtcctctcagctgtgacagtgctgatctgagctgt
tacctggtcgacaacaacggctttgtcgtgctgtccaaagagaggagagagattggtcgc
ttctttggcgaggtagacgggtccatcatggcttcgttgctcaagatgggaatgtttaaa
aaagtgtcgttgttcgactaccaggcaatgtgcaagaccggccaccatcacgccagcagc
gcgcgacctctgctcagcccattctacgtcatcatggctttgatgagatggttcttctcc
aacgcgctgatgttcctgctggactttaacctctgtggtctctggcactctgattatttt
gtggatgccaaagctggctatcacacatctcataagcagaagaagttggacgcgctgcaa
ccctgcgacacagcttacccaggcttcatgtacgacccgtctgtcagagaggccaacagc
ctcaacaagtgtggacgctgccagaagatgtttgtggtgcagcagattcctgacagtaac
ctggttctggtcgtgactcaggcctactgtgactgctcccgtcagtatggagccattctg
ctggagcccaaagagatcaaatataacgccacagtgaagtgcaacaggatgagatcccag
aaggtgcggcggcgccctcagtcatgccacgcctaccacccaaaggagaacgctaaggac
tgcggcggggcggcagccatctccctgtcgctctctctcttctctgcctctctgctcatc
tcattggtcgctgagttctaa
DBGET
integrated database retrieval system
