Maylandia zebra (zebra mbuna): 101473358
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Entry
101473358 CDS
T02814
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha isoform X2
KO
K08527
retinoic acid receptor alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101473358 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101473358 (rara)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101473358 (rara)
Nuclear receptors [BR:
mze03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
101473358 (rara)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101473358
NCBI-ProteinID:
XP_004562456
UniProt:
A0A3P9BT32
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Position
LG8:complement(7959474..8102188)
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AA seq
447 aa
AA seq
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MAGKGNPVPGPHLNGFPVPTYSYFFPHMLGSLSPPALPGLPLSGYSTPSPATIETQSTSS
EEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREK
NCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVLSPDTEQMI
DRVRKAHQDTFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTVEFAKQLPG
FTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRNQMHNAGFGPLTDL
VFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALKIYVRKRRP
HKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESGAAGGR
PSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaagggcaacccggtgccaggcccccacctcaacggcttccccgtgcccacc
tactcctacttcttcccccacatgttggggagcctgtcgcctccagccctgccgggactg
cctctcagtggatacagcaccccctcaccagccacaatagagacccagagtaccagctca
gaggagatagtgccaagcccgccctcgcctccccctccaccccgcgtctacaagccctgc
tttgtgtgccaggacaagtcctcagggtaccactatggtgtcagcgcctgtgagggttgc
aagggcttctttcggcgaagcattcagaaaaacatggtgtacacttgtcaccgggagaag
aactgcatcatcaacaaagtcacccgcaaccgctgccagtactgtcggttgcagaagtgc
ctggaagtcgggatgtcgaaggagtcggtgaggaacgaccggaacaagaagaaaaaggat
gagaagaagcaggagtgcacagagagctacgtgctgagtcctgacacggagcagatgatc
gacagggttcgcaaggcacaccaggatactttcccctccctctgccagctgggcaaatac
actacgactaacagctcagaacgacgtgtgtccttggacgtagacctgtgggacaagttc
agtgagctgtccactaagtgcatcatcaagacagtggagtttgccaagcagctgcccggc
ttcacgacgctcaccatcgccgaccagatcactctgctcaaagctgcctgtctggacatc
ctgatactgcggatctgcacacgctacacaccagagcaagacacgatgactttctcagat
ggacttacgctaaaccgaaaccagatgcacaacgctggcttcggtcccctcactgatctg
gtttttgccttcgccaaccagctccttcctctggagatggatgatgcagagacggggctg
cttagtgccatctgtttgctgtgtggagatcgacaggacttggaagaggcagacaaggtg
gacatcctgcaggaaccccttctggaggcgctgaagatttatgtaaggaagaggaggcca
cacaaaccgcacatgttccccaagatgctgatgaagatcactgatcttagaagcatcagt
gctaaaggagctgagcgtgtcatcacgctgaagatggagatccccggctccatgccacct
ctcatccaggagatgctggagaactcagaaggtctggaaagcggagccgcaggcggacga
cccagcggcgcccccccaggcagctgcagccccagcctgtcccccagctctgcccaaagc
agtccagctacacaatcgccgtag
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