Maylandia zebra (zebra mbuna): 101481144
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Entry
101481144 CDS
T02814
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor alpha-B
KO
K08527
retinoic acid receptor alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101481144
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101481144
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101481144
Nuclear receptors [BR:
mze03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
101481144
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101481144
NCBI-ProteinID:
XP_004572594
UniProt:
A0A3P9CBG9
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Position
LG4:complement(3279545..3297351)
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AA seq
482 aa
AA seq
DB search
MYESVDVVGLSPSPSSPSTGSFLSMDYYHRPPGLGPEKGLLSVVGGLQRPFGGSLLTGRH
WSGSSHSIETESTSSGDLLVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGFF
RRSIQKNMVYTCHRDKVCVINKVTRNRCQSCRLQKCLDVGMSKELVRNDRTKKKKEEKKQ
PDTELYVLSADMEQMIERVRRAHQDTFPSLCQLGKYTTSNSSEQRVALDVSLWDKFSELS
TKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTL
NRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEESEKVDILQ
EPMLEALKLYVRRRRPDKPCMFPKILMKITDLRSISVKGAERVITLKMEIPGSMPPLIQE
MLENSEGLEGHGAGGGKGRGGARREVEEEPGSCRSSPMHKPVHFPSPSPVPRSPSSPSPP
ST
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaagcgtggatgttgtgggtttaagcccaagccccagcagcccaagcacgggc
tcttttctaagcatggactactaccacagacccccggggctcgggccggagaagggactc
ttgtccgttgtaggaggactccagcgcccctttggagggtctctgctgaccggcaggcac
tggagcggatccagccactccatagagaccgagagcacgagctcaggggacctgcttgtc
cccagtcctccctcacctcctccaccacctcgtatctacaaaccctgctttgtctgccag
gacaaatcatcaggataccattatggagtcagcgcctgcgaaggctgcaagggtttcttt
cggaggagcatccagaagaacatggtgtacacgtgccaccgggacaaagtctgtgtcatc
aacaaagtgacgaggaaccggtgtcagtcatgtcgactgcagaagtgcctggatgtgggc
atgtctaaagagctggtgcgaaatgaccgaacaaagaagaagaaggaagagaagaagcag
cccgacacagagctctacgtcctgtcagcagacatggagcagatgatcgaacgagttcgc
cgggcccatcaggatacattcccctccctctgtcagctgggaaaatacaccacgagcaac
agctcggagcagcgcgtggctctggatgtgagtctctgggacaagttcagcgaactgtct
accaaatgcattattaagacagtggagtttgctaagcagctcccaggtttcaccacccta
accatcgctgatcagatcacgctgctcaaagccgcatgcctcgacatactgattctgagg
atctgcacccgctacactccagaccaggacaccatgaccttctccgacggcctcaccctc
aatcgtactcagatgcacaacgccgggttcggaccgctcacagacctggtgttcgccttt
gccaaccagctgctcccgctggaaatggatgatgcagaaacggggttactcagtgccatc
tgcctgctctgtggagatcgtcaggatctggaggaatcagagaaggtggatattcttcag
gagccgatgctcgaagctttgaagctctatgtgaggaggaggcggcctgacaaaccctgc
atgttccccaagatactgatgaagattactgacctcaggagcatcagtgttaaaggagca
gagcgagtgatcacactgaaaatggagatccctggctccatgcctcctctcatccaggag
atgctggagaactctgagggactggaggggcacggagcagggggaggaaaaggaagagga
ggagccaggagggaggtggaagaagaaccgggaagctgccgttcgagtccgatgcacaaa
ccggtccattttcccagcccgagccccgttccccgctccccctcctctccttcccctccc
tccacctga
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