Notothenia coriiceps (black rockcod): 104949876
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Entry
104949876 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor alpha-like
KO
K08527
retinoic acid receptor alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104949876
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104949876
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104949876
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
104949876
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
104949876
NCBI-ProteinID:
XP_010774606
UniProt:
A0A6I9NJD6
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Position
Unknown
AA seq
337 aa
AA seq
DB search
MVYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDDKKPECMEIYV
LSPETERMIERVRKAHKETFPSLCQLGKYTTSNSSERRVSLDVNLWDKFSELSTKCIIKT
VEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN
AGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEAL
KIYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEG
LESAAASSRASGAPPGSCSRPSLSPSSAQSSPATQSP
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacacttgtcaccgggagaagaactgcatcatcaacaaagtcacccgcaaccgc
tgccagtactgtcggctgcagaagtgcctggaagtcgggatgtcgaaggagtcagtgagg
aacgatcggaacaaaaagaagaaggatgacaagaagccggagtgcatggagatctacgtg
ctgagtcctgaaacggagaggatgatcgaacgggttcgaaaggcacacaaggaaacgttt
ccctccctgtgccagctgggcaaatacactacgagtaacagctcagaacgacgtgtatct
ctggacgtaaacctgtgggacaagttcagtgaactctccaccaagtgcatcataaagacg
gtggagtttgctaagcagctgcccggcttcacaacgctcaccatcgccgaccagatcact
ctgctaaaggccgcctgtctggacatcctgatactccggatctgtacgcgctacacacca
gagcaggacaccatgactttctcagatggactcacgctaaatcgaacccagatgcacaac
gcaggtttcggccctctcaccgacctggtttttgcctttgccaaccagctccttcctctg
gagatggacgacgcagagacggggctgctcagcgccatctgtttgctctgtggagatcgt
caggacttggaacaggcagagaaggtggacgtcctgcaggagcctttactagaggcgtta
aagatttacgtaaggaggaggaggccccacaaaccgcacatgttccccaagatgctgatg
aagatcaccgatctgaggagcatcagcgctaaaggagccgagcgagtcatcaccctgaag
atggagatccccggctccatgccccccctcatccaggagatgctggagaactcggaaggt
ctggagagcgcggcggcgagcagccgggcgagcggcgccccccccggctcctgcagccgc
cccagcctgtcccccagctcggcccaaagcagtcccgccacacaatcgccgtag
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