Notothenia coriiceps (black rockcod): 104960119
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Entry
104960119 CDS
T04920
Symbol
tjp1
Name
(RefSeq) LOW QUALITY PROTEIN: tight junction protein ZO-1
KO
K05701
tight junction protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04520
Adherens junction
ncc04530
Tight junction
ncc04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104960119 (tjp1)
04530 Tight junction
104960119 (tjp1)
04540 Gap junction
104960119 (tjp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104960119 (tjp1)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
104960119 (tjp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
Guanylate_kin
SH3_2
PDZ_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
104960119
NCBI-ProteinID:
XP_010786387
UniProt:
A0A6I9PDY0
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MITCAFLWVGFFVAVDSTMVNYQKYITVMQLALGVTASNKEHCLPPRKHMWIHPQHPSPT
AGSITGASSVSTIQGKPSLRRIKGRIHRSKSLDSLDLLDSNSAAMEETVIWEQHTVTLHR
APGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGLLQXDSRMVNAVSMDNVEHAY
AVQQLRKSGKIAKITIRRKRKVHVPMGRLGERETMSEHDEEEDSYDEEIYETRSGRSGAY
SAVGGAISRRSGRGSGRRDRERERSGSRERSISPRSDRRSHNLPPRPAKVTLVKSRKNEE
YGLRLASHIFVKDISPESLAARDGNIQEGDVVLKINGTVTENLSLIDAKKLIERSKGKLK
MVVQRDDRATLLNIPDLDDSLASANASDRDDISDIHSLASDHSNRSHDRHRSSRSRSPDR
RSEPSDHARHSPPQISNGSWRIPSHRSRDDERISKPSSTPVKLPEEVPLPKPKEAAAARE
EKQLPPLPEPKPVYAQPGQPDVDLPVSPSDAPVPSATHDDGILRPSMKLVKFKKGESVGL
RLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFANIIREEAVLFLLDLPKGEE
VTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLG
SWLAIRIGKNHQEVERGIIPNKNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLR
KSREDLSSQPVQTKFPAYERVVLREAGFLRPVVIFGPIADVAREKVAREEPDLFELAKSE
PRDAGTDQRSSGIIRLHTIKQIIDRDKHAVLDITPNAVDRLNYAQWYPIVVFLNPDTKQG
VKNMRTRLCSESRKSARKLYERALKLRKNNHHLFTTTINMNNMNDGWYGALKETTQQQQN
QLVWVSEGKADGTTEDDLDIHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTD
QELDETLNDEVGLPTEPAITRSSEPVREDPPVIQDTPGYPGYQHPVQPDPASRIDPAGFK
MAAPQQQEEAAQTVVAPPAVEQSVQIEGLHPEEPPAAAAAPQADSLSSPSSAPELIEPHQ
SGPETKMYKKDLYNMEDPVRINHGLKQSLSYSHQPPYQDKQPYREYDHPPYGYDSGGYTE
PKPHNSDSHLHYDNRVPHYNEQWPPYDQQTSSQPGGGYQPGHQQPMAYSPRSPFDDCPGR
DYSPPQPRYDEAPPVGYDGRRRHSKPGPIRYDEPPPPPPAGYDARSPYDAEPHCFPINSP
RSPDPPKQYYSDSGLRPAYTPGPPSRAFKQGMHDPMMNSEPPLPPHIPETLPSPGEPATT
PGSKPLPPPLREDLEDDPAMKPQSVLNRVKMFENKRSVSMDRAKEGLESALRVAEGVGFE
DWARVPEPQKPHTNKPLDDMMRSNHYDPDEDEEYYRKQLSYFDRRSFDSKAMGQPSPGIN
RFHDLPKTAQLSYPYNRVESAEKVSPVEKRYEPLPIISPSSQYGPPASAIPPNTLPKLSP
NEVNSIPEPLTSPIPKPELPALRPPSRDEPAPGGYPPPRGLPDKSPVNGTDTALPKTLGS
HAPTSYNRYVPKPYTSTARPFERKFESPKFNHNLLPNDTQVKTELIGMVGNSGGKPQLSP
QPLDHDSGLDTFTRTIDNRPKYQHNNINAIPKAIPVSPSTLDDDDEDEGHTVVATARGIF
NCNGGVLSSIETGVSIIIPQGAIPENVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMC
GPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKTWQNKSLPGDPNYLVGANC
VSVLIDHF
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctgtgcttttctttgggttggattttttgtagcggtggacagtaccatggtg
aattaccagaaatacattactgttatgcagctggctctgggggtgaccgcctccaacaaa
gaacattgtcttccacccaggaagcatatgtggatacacccccagcaccccagcccgacc
gctggctccatcacaggagcctcctcagtgagcaccattcagggcaaaccatccctccgc
cgcatcaagggccgcattcacaggagcaagagcctggactcactcgacctcctggactcc
aacagcgccgcaatggaggagactgtcatttgggaacagcacacagtaacactacacagg
gcaccagggtttggcttcgggatagccatatcaggaggtcgggataaccctcattttcag
agtggcgagacctccattgtcatctcggatgttctgaaaggaggtccagcagaaggcctg
ctgcagtaagatagtcgtatggtcaatgctgtctccatggacaacgtggagcatgcatac
gcagtccagcagcttcgcaagagtgggaaaattgccaaaattacaatcaggcgaaagagg
aaggtgcatgtccccatgggccgcctgggggagagggaaacgatgtcagagcatgacgag
gaggaggacagctacgacgaagagatatacgagacgcggagcggacgcagcggggcttac
agcgctgtgggcggggctattagcaggcgcagcgggcgtggcagcgggcggagggacagg
gaacgggaacgcagcggctcgcgggagaggagcatctccccacgctcagaccgccgctca
cacaacctgcccccccgccccgccaaggtcacacttgtcaaatcccgcaaaaatgaagag
tatggcctccgcctggccagccacatctttgtcaaggacatttcccccgagagcctggca
gccagggacggcaacatccaggagggagacgtggtactgaagattaacggcacagtgaca
gagaacctctccttgatagatgccaagaagctgatagaaaggtcaaagggcaaactaaaa
atggtggttcagagggacgacagggcgaccctgctgaacatccctgacctcgatgacagc
ctcgcttcagccaacgcctcggacagagacgacatttcagatatccattcgctggcatcc
gaccattcaaatcgatcgcatgacagacatcgtagcagccgctcgcgctctccagaccga
agatctgaaccctcagaccacgcccgacactcgcctccacagatcagcaacggcagctgg
agaatacccagtcacagaagtcgtgatgacgaacgaatctcgaagccgtcttcaacccca
gtgaagctcccggaggaggttcctctgcccaaacccaaggaggcggccgctgctagagag
gagaaacaacttcctccactcccagagccaaagcctgtgtatgctcagcctggacagcca
gatgttgacctgccagtcagcccctctgatgcccccgtgccaagcgctacccatgacgat
ggcatcctacggccaagcatgaagctggtgaagtttaagaagggggagagtgtggggctg
cgtctggcgggggggaacgacgtgggcatcttcgtagccggcgtgctggaggatagccca
gctgctaaggagggcctggaggagggcgaccaaattctcagggtaaataatgtagatttt
gcaaacataatccgagaggaggcggtgctgttcctccttgaccttcctaagggtgaagag
gtcactattctagcccagaagaagaaagatgtgtacagacggatcgttgagtcagatgtc
ggtgactccttctacatccggacgcactttgagtatgagaaggaatctccgtatgggttg
agtttcaacaagggagaggtgtttcgtgtggtggacaccctctacaacggaaagctgggc
tcctggcttgctattcgcatcggaaagaaccaccaagaggtggagagggggatcatcccc
aacaaaaacagagcggagcagctgtccagtgtgcagtacactctccctaaaacagcaggg
ggcgacagggccgacttctggaggtttcgtggtcttcgcagctccaagaggaacctgagg
aagagccgggaagacctctcctcacagccagtccaaacaaagttcccggcttatgaaagg
gtcgttctgagagaggctggtttcctgagacctgtggtgatatttggcccgatcgctgat
gttgcccgagaaaaagtcgcgagagaagagcccgatctttttgagcttgccaagagtgaa
ccgagagatgcaggaacagaccaacgcagttcaggaatcattcgtcttcacaccatcaag
cagataattgacagagacaaacatgctgtcctggacatcaccccgaatgctgtggacagg
ctgaactatgctcagtggtacccgattgtagtcttccttaaccctgacactaagcagggc
gtgaagaacatgaggaccagactgtgttcagagtccaggaagagcgccaggaagctctat
gagagagccctcaaactgaggaagaataatcaccacctgttcaccaccaccatcaacatg
aacaatatgaacgatggctggtacggagctctgaaagaaacgacccagcagcagcagaac
cagctggtgtgggtatcagagggcaaggctgatggcactacagaggatgacttggacatc
catgacgaccgcctgtcctacctgtcggccccgggcagtgagtactccatgtacagcacc
gacagccgccacacctcagactacgaggacacggacacggagggcggggcgtacacggac
caggagctggacgagactctgaacgacgaggtgggtctgcccacggagcccgccatcacc
cgctcttcagagcccgtgcgagaagacccgcccgtgattcaggacacccctggttaccct
ggataccagcaccctgtgcagcccgacccagccagccgcatagaccctgctggcttcaag
atggccgctccgcagcagcaagaggaggctgctcagacggtggtagcgccccctgctgtt
gagcagtctgtacagattgagggtttgcaccccgaggagccgcctgctgcagccgcagct
cctcaggctgactcacttagcagccccagctctgcccctgagcttattgaaccccaccag
tctggcccagaaacaaagatgtacaagaaagatctgtacaatatggaggaccccgtgcga
atcaaccatggcctgaagcagtctctgagctacagtcaccagccgccgtaccaggacaaa
cagccataccgtgaatacgaccacccgccttacggatacgacagcggcggctacacagaa
ccaaagcctcacaactctgactctcacctgcactacgataaccgtgtgcctcattacaac
gagcagtggcccccctacgaccagcagacctcgtcccagcccgggggggggtaccagccg
ggccaccagcaacccatggcctacagcccccgctccccctttgacgactgtccagggcgg
gactacagcccccctcagccacgctacgatgaggccccaccggtgggctacgatggaaga
cgccgccacagtaaacccgggcccattcgttacgacgagcccccacccccgccccctgct
ggctatgacgcccgctctccttacgatgcagaacctcactgcttcccgattaactcaccc
cgatcgccggacccccccaagcagtattacagtgactctggtctgaggcccgcctacact
cccgggcctccaagcagggctttcaagcaggggatgcacgaccctatgatgaactccgaa
cctccacttcccccccatataccggagaccctgccctccccaggtgagccagcgaccact
cccggctccaaacccctccctcctccgctgagggaagacctggaagatgacccggccatg
aagccgcagtcggtgctgaacagagtgaagatgtttgagaataaacggtctgtgtccatg
gaccgcgctaaagaaggactagaatcagcactcagggttgctgagggagttggctttgag
gactgggccagggtccctgagccacagaagccccacactaataaacccctggatgacatg
atgcgttccaaccactatgacccagatgaggatgaggagtactacaggaagcagttgtcc
tactttgaccgccgtagcttcgacagcaaggccatgggccaacccagccctggcatcaac
cgcttccacgaccttcccaaaacagctcagctgtcctacccatacaacagagttgagtct
gctgagaaggtgagtccagtggagaaaagatatgaacccctgcccataatcagcccgtca
tcacagtacggcccccccgcgtccgccatcccgcccaacacactgcccaagctcagcccc
aacgaggtgaactccataccggagccgttgacctcccccatccctaaacctgagctaccg
gcgctgcggccgcccagcagggacgagccagcaccggggggctacccgcccccgaggggc
ctccccgacaaatccccggtcaacggcactgacacagcactgccaaagaccctgggcagt
cacgcgccgactagctacaaccgctacgtccccaagccgtacaccagcacggcgcggccc
tttgagcgcaagtttgagagccccaagttcaaccacaacctgctgcccaacgacacccag
gtgaagacggagctcatcgggatggtgggcaacagcggggggaagccccagctgtccccc
cagcctctggaccacgacagcggcctggataccttcacccgcaccatagacaacaggccc
aaataccagcacaataacatcaacgccatccccaaggccatccctgtaagccccagcacg
ctggacgatgacgacgaggatgaaggacacaccgtggtggccactgcccgggggatcttc
aactgtaacggaggggtcctgagctccatcgagacgggcgtcagcatcattatcccccag
ggggccatccccgagaacgtggagcaggagatctacttcaaggtgtgccgggacaacagc
atcctgccccccctcgacaaggagaaaggagaaacgctgctaagtccactggtgatgtgt
ggcccgcatggactcaagttcctgaagccggtggagctgcgcctccctcactgtgcgtct
atgacccctgatggttggtcttttgctctaaaatcctccgactcctcgtcgggtgatccc
aaaacctggcagaacaaatctctccccggagaccccaactacctggtgggtgcaaactgt
gtgtcagtgctcattgaccacttctga
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integrated database retrieval system
