Nocardia otitidiscaviarum: FOH10_21720
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Entry
FOH10_21720 CDS
T06114
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nod
Nocardia otitidiscaviarum
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nod03032
]
FOH10_21720
03036 Chromosome and associated proteins [BR:
nod03036
]
FOH10_21720
03400 DNA repair and recombination proteins [BR:
nod03400
]
FOH10_21720
DNA replication proteins [BR:
nod03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FOH10_21720
Chromosome and associated proteins [BR:
nod03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FOH10_21720
DNA repair and recombination proteins [BR:
nod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FOH10_21720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Saf4_Yju2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
QDP80940
UniProt:
A0A516NPW7
LinkDB
All DBs
Position
complement(4849802..4850482)
Genome browser
AA seq
226 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEQMVDTIVRAVNKGQSVTITGFGVFEQRKRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAIIAGKQKIAASGPAVKRGVAAPVSGKAAGARKT
TAKKTTAKKTAKKAAAKKTTATKAPAKTTAKKAASKAPAKKAAAKKTVAKKTTAKKTAAK
KAPAAKKTTAKKTTAKATAAKKTTAKKTAAKKAPAKKTAAKRTARR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgatgttctgaccgagaagttgggtactgacaggcgcacg
gctactgcggcagtggagcagatggtcgacaccatcgtgcgcgctgtgaacaaaggccag
agcgtcaccatcaccggattcggtgtcttcgaacagcgtaagcgggccgctcgcgtcgcc
cgtaacccgcgcaccggcgaaaccgtcaaggtgaagccgacttcggttcccgcgttccgt
ccgggcgcgcagttcaaggcgatcatcgcgggtaagcagaagatcgcggcgagcggcccg
gccgtgaaacgcggtgtggccgccccggtgtcgggcaaggcggcgggcgccaggaagacg
accgccaagaagacgaccgccaagaagacggccaagaaggccgccgcgaagaagaccacc
gccaccaaggccccggccaagaccacggcgaagaaggccgcgtcgaaggccccggccaag
aaggcggcggccaagaagaccgtggccaagaagaccacggccaagaagacggccgcgaag
aaggccccggccgccaagaagacgacggcaaagaagaccactgccaaggcaactgcggcg
aagaagaccacggccaagaagacggccgcgaagaaggcgcccgcgaagaagaccgccgcc
aagcgcaccgcccgtcgctga
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integrated database retrieval system
