Neogale vison (American mink): 122906282
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Entry
122906282 CDS
T08764
Symbol
RARA
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04659
Th17 cell differentiation
nvs04915
Estrogen signaling pathway
nvs05200
Pathways in cancer
nvs05202
Transcriptional misregulation in cancer
nvs05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
122906282 (RARA)
09152 Endocrine system
04915 Estrogen signaling pathway
122906282 (RARA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122906282 (RARA)
05202 Transcriptional misregulation in cancer
122906282 (RARA)
09162 Cancer: specific types
05221 Acute myeloid leukemia
122906282 (RARA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122906282 (RARA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nvs03310
]
122906282 (RARA)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122906282 (RARA)
Nuclear receptors [BR:
nvs03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122906282 (RARA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122906282
NCBI-ProteinID:
XP_044103966
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Position
5:complement(21895093..21939376)
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AA seq
472 aa
AA seq
DB search
MTSPPGPLVFAGKMYESVEVGGLTPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLR
TPLWNGSNHSIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKG
FFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEAP
KPECSESYTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSE
LSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGL
TLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDM
LQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLI
QEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccgcccggacctcttgtcttcgcggggaagatgtacgagagtgtggaagtg
ggggggctcacccccacccccaatcccttccttgtggtggatttttataaccagaaccgg
gcctgtttgctcccggagaaggggctccctgcccctggtccctactccaccccgctccgg
actccgctttggaatggctcaaaccactccatcgagacccagagcagcagttcagaagag
atagtgcccagccctccctcgccgccccctctcccccgcatctacaagccttgctttgtc
tgccaggacaaatcctcaggctaccactatggggtcagcgcctgtgagggctgcaagggc
ttcttccgccgcagcatccagaagaacatggtgtacacgtgtcaccgggacaagaactgc
atcatcaacaaggtgacccggaaccgctgccagtattgccgactgcagaagtgctttgaa
gtgggcatgtccaaggagtctgtgaggaacgacagaaacaagaagaagaaggaggcgccc
aagcccgagtgctccgagagctacacgctgacgcctgaggtcggggagctcatcgagaag
gtgcgcaaagcgcaccaggaaaccttccctgccctctgccagctgggcaaatacactacg
aacaacagctcagagcaacgtgtctctctggacattgacctctgggacaagttcagtgaa
ctctccaccaagtgcatcattaagactgtggagttcgccaagcaactgcccggcttcacc
accctcaccattgctgaccagatcaccctcctcaaggctgcctgcctggacatcctgatc
ctgcggatctgcacgcggtacacgcccgagcaggacaccatgaccttttccgatgggctg
accttgaaccggacccagatgcacaatgccggcttcggccccctcacggacctggtcttc
gccttcgccaaccagctgctgcccctggagatggatgatgctgagactgggcttctcagt
gccatctgtctcatctgtggagaccggcaggacctggagcagccagacagggtggacatg
cttcaggagccgctgctggaggcgctgaaggtctatgtgcggaaacggaggcccagccgc
ccccacatgttccccaagatgctgatgaagatcacagacctgcgaagcatcagtgctaag
ggggctgagcgggtgatcaccctgaagatggagatcccgggctccatgccacctctcatc
caggaaatgctggagaactcggagggcctggacactctgagcggacagccagggggcggg
gggcgggatgggggcggcctggcccccccacccggcagctgtagccccagcctcagtccc
agctcgaacagaagcagcccggccacccactccccgtga
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